Os10g0206500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0206500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.81 | 0.467 | 9.04 | -1.24 | 2.52 | 1.14 | 1.61 | -1.54 | -0.462 | 7.19 | 21.88 | 1285 | -- | -- |
| 100.38 | 0.467 | 8.99 | -0.828 | 2.54 | 1.11 | 1.62 | -- | -0.346 | 7.08 | 18.44 | 1405 | -- | -- |
| 105.74 | 0.479 | 9.04 | -1.21 | 2.52 | 1.15 | -- | -1.58 | -0.466 | 7.17 | 21.96 | 1287 | -- | -- |
| 107.41 | 0.483 | 8.99 | -0.837 | 2.51 | 1.18 | -- | -- | -0.365 | 7.05 | 18 | 1405 | -- | -- |
| 438.51 | 0.975 | 9.1 | -1.2 | -- | 1.19 | -- | -1.52 | -0.417 | -- | 22.88 | 1360 | -- | -- |
| 135.01 | 0.545 | 8.93 | -0.431 | 2.54 | -- | 1.66 | -- | -0.107 | 6.97 | -- | -- | -- | -- |
| 142.19 | 0.558 | 8.94 | -0.401 | 2.55 | -- | -- | -- | -0.111 | 6.95 | -- | -- | -- | -- |
| 439.28 | 0.976 | 9.06 | -0.839 | -- | 1.47 | -- | -- | -0.366 | -- | 16.2 | 1384 | -- | -- |
| 121.16 | 0.513 | 8.96 | -- | 2.48 | 0.832 | -- | -- | -0.227 | 7.13 | 21.84 | 1343 | -- | -- |
| 483.32 | 1.03 | 8.99 | -0.348 | -- | -- | -- | -- | -0.0635 | -- | -- | -- | -- | -- |
| 146.43 | 0.566 | 8.93 | -- | 2.54 | -- | -- | -- | -0.0664 | 6.96 | -- | -- | -- | -- |
| 452.61 | 0.991 | 9.01 | -- | -- | 0.904 | -- | -- | -0.167 | -- | 23.4 | 1360 | -- | -- |
| 486.51 | 1.03 | 8.98 | -- | -- | -- | -- | -- | -0.0249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 6 | 97.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 17 | 97.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 13 |
| 48 | 98.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 59 | 98.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 63 | 98.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 23 | NA |
| 68 | 98.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 79 | 98.22 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 97 | 98.31 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 128 | 98.45 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 133 | 98.47 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 159 | 98.54 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 186 | 98.62 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 244 | 98.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 303 | 98.92 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 327 | 98.98 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 338 | 99.00 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 397 | 99.12 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 407 | 99.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 21 |
| 410 | 99.15 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 434 | 99.19 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 450 | 99.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 451 | 99.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 452 | 99.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 470 | 99.23 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 477 | 99.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 521 | 99.30 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 536 | 99.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 542 | 99.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 592 | 99.37 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 609 | 99.39 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 687 | 99.48 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 729 | 99.51 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 743 | 99.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 756 | 99.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 22 |
| 757 | 99.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 758 | 99.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 759 | 99.55 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 760 | 99.55 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 770 | 99.56 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 804 | 99.61 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 825 | 99.63 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 19 |
| 835 | 99.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 840 | 99.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 17 |
| 844 | 99.65 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 857 | 99.67 | humidity | 60 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 858 | 99.67 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 9 |
| 898 | 99.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 904 | 99.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 934 | 99.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 13 |
| 945 | 99.75 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 960 | 99.76 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 974 | 99.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 985 | 99.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 17 |