Os10g0204400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoenolpyruvate carboxykinase (Fragment).
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Os10g0204400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoenolpyruvate carboxykinase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.12 | 0.613 | 3.84 | 0.219 | 0.816 | 1.26 | -0.943 | 2.26 | 0.453 | 5.26 | 60.12 | 1597 | -- | -- |
| 177.82 | 0.621 | 3.83 | 0.468 | 0.727 | 1.44 | -0.745 | -- | 0.501 | 5.4 | 59.66 | 1644 | -- | -- |
| 172.12 | 0.611 | 3.83 | 0.226 | 0.86 | 1.29 | -- | 2.2 | 0.463 | 5.11 | 60.94 | 1543 | -- | -- |
| 179.1 | 0.623 | 3.83 | 0.467 | 0.727 | 1.44 | -- | -- | 0.506 | 5.25 | 59.53 | 1641 | -- | -- |
| 190.25 | 0.642 | 3.81 | 0.267 | -- | 1.78 | -- | 1.48 | 0.592 | -- | 65.39 | 1856 | -- | -- |
| 222.55 | 0.699 | 3.85 | 0.456 | 0.925 | -- | -0.838 | -- | 0.399 | 5.08 | -- | -- | -- | -- |
| 224.29 | 0.701 | 3.85 | 0.456 | 0.919 | -- | -- | -- | 0.403 | 4.98 | -- | -- | -- | -- |
| 193.08 | 0.647 | 3.82 | 0.44 | -- | 1.88 | -- | -- | 0.621 | -- | 65 | 1856 | -- | -- |
| 184.51 | 0.633 | 3.83 | -- | 0.621 | 1.57 | -- | -- | 0.512 | 5.06 | 64 | 1732 | -- | -- |
| 268.66 | 0.766 | 3.86 | 0.49 | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
| 229.78 | 0.709 | 3.86 | -- | 0.927 | -- | -- | -- | 0.352 | 4.97 | -- | -- | -- | -- |
| 197.86 | 0.655 | 3.82 | -- | -- | 1.96 | -- | -- | 0.61 | -- | 66.89 | 1856 | -- | -- |
| 274.99 | 0.774 | 3.87 | -- | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 5 | 165.20 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 6 | 165.28 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 9 | 165.52 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 12 | 165.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 21 | 165.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 22 | 165.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 9 |
| 26 | 166.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 12 |
| 27 | 166.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 28 | 166.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 30 | 166.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 12 |
| 36 | 166.32 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 37 | 166.32 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 7 |
| 43 | 166.52 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 7 |
| 47 | 166.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 12 |
| 54 | 166.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 56 | 166.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 70 | 167.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 75 | 167.38 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 79 | 167.43 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 121 | 168.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 129 | 168.36 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 164 | 169.00 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 176 | 169.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 178 | 169.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 198 | 169.44 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 204 | 169.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 207 | 169.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 208 | 169.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 18 |
| 211 | 169.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 250 | 169.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 265 | 170.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 283 | 170.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 284 | 170.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 319 | 170.36 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 332 | 170.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 335 | 170.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 345 | 170.47 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 357 | 170.50 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 370 | 170.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 399 | 170.65 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 509 | 171.04 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 19 |
| 537 | 171.12 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 19 |
| 604 | 171.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 611 | 171.38 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 680 | 171.63 | humidity | 60.0 | 1440 | > th | dose dependent | no | NA | NA |
| 681 | 171.63 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 721 | 171.78 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 785 | 172.04 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 815 | 172.20 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 968 | 172.95 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 12 |