BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0204400 Os10g0204400|AK103839
         (637 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37870.1  | chr4:17802974-17806332 REVERSE LENGTH=672          976   0.0  
AT5G65690.1  | chr5:26266477-26269486 FORWARD LENGTH=671          945   0.0  

>AT4G37870.1 | chr4:17802974-17806332 REVERSE LENGTH=672
          Length = 671

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/671 (70%), Positives = 531/671 (79%), Gaps = 35/671 (5%)

Query: 2   MEAKDGQAWLGTNGY-------------GSRREEDGVCHDDSATPVRANTVDELHSLQRK 48
           M A +G A  G  G+             G+ +   GVCHDDS   V A T+DELHSLQ+K
Sbjct: 1   MSAGNGNATNGDGGFSFPKGPVMPKITTGAAKRGSGVCHDDSGPTVNATTIDELHSLQKK 60

Query: 49  PQVV-----------------EDRHRXXXXXXXXXXXXMTCGIGPKLVNGDPARKKEMAG 91
                                E+R +            +T   GPK+V GDPA KK    
Sbjct: 61  RSAPTTPINQNAAAAFAAVSEEERQKIQLQSISASLASLTRESGPKVVRGDPAEKKTDGS 120

Query: 92  K--AVTHHQHH--ITVPTITVSDSDLKFTHVLYNLSPSELYEHAIKYEKGSFITSSGALA 147
              A  H QHH   +  T  VSDS LKFTHVLYNLSP+ELYE AIKYEKGSFITS+GALA
Sbjct: 121 TTPAYAHGQHHSIFSPATGAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSNGALA 180

Query: 148 TLSGAKTGRSPRDKRVVKDETTDD-LWWGKGSPNIEMDEQTFLINRERAVDYLNSLDKVF 206
           TLSGAKTGR+PRDKRVV+D TT+D LWWGKGSPNIEMDE TF++NRERAVDYLNSL+KVF
Sbjct: 181 TLSGAKTGRAPRDKRVVRDATTEDELWWGKGSPNIEMDEHTFMVNRERAVDYLNSLEKVF 240

Query: 207 VNDQFLNWDPNNRIKVRIISARAYHSLFMHNMCIRPTYEELENFGEPDFTIYNAGQFPCN 266
           VNDQ+LNWDP NRIKVRI+SARAYHSLFMHNMCIRPT EELE+FG PDFTIYNAGQFPCN
Sbjct: 241 VNDQYLNWDPENRIKVRIVSARAYHSLFMHNMCIRPTQEELESFGTPDFTIYNAGQFPCN 300

Query: 267 RYTHYMTSSTSIDLNLKRREMVILGTQYAGEMKKGLFSVMHYLMPKKQILSLHSGCNMGR 326
           RYTHYMTSSTS+DLNL RREMVILGTQYAGEMKKGLFSVMHYLMPK++ILSLHSGCNMG+
Sbjct: 301 RYTHYMTSSTSVDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRRILSLHSGCNMGK 360

Query: 327 GGDVAXXXXXXXXXXXXXXXDRNRILIGDDEHCWSDNGISNIEGGCYAKCIDLSQEKEPD 386
            GDVA               D NR LIGDDEHCW++ G+SNIEGGCYAKC+DLS+EKEPD
Sbjct: 361 DGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPD 420

Query: 387 IWDAIKFGTVLENVVFDEHSREVDYTEKSVTENTRAAYPIEYIANAKIPCVGPHPKNVIL 446
           IW+AIKFGTVLENVVFDEH+REVDY++KSVTENTRAAYPIE+I NAKIPCVGPHP NVIL
Sbjct: 421 IWNAIKFGTVLENVVFDEHTREVDYSDKSVTENTRAAYPIEFIPNAKIPCVGPHPTNVIL 480

Query: 447 LACDAFGVLPPVSKLSHAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPT 506
           LACDAFGVLPPVSKL+ AQTMYHFISGYTALVAGTEDGIKEP ATFSACFGAAFIMLHPT
Sbjct: 481 LACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPT 540

Query: 507 RYAAMLADKMNKHGATGWLVNTGWIGGSYGVGERISLAYTRKIIDAIHSGELLARSYKKT 566
           +YAAMLA+KM   GATGWLVNTGW GGSYGVG RI LAYTRKIIDAIHSG LL  +YKKT
Sbjct: 541 KYAAMLAEKMKSQGATGWLVNTGWSGGSYGVGNRIKLAYTRKIIDAIHSGSLLKANYKKT 600

Query: 567 DVFGLDIPTKVEGVPSELLDPINTWEDKDSYKLTLLKLSDLFKRNFKVFANYKKGGVSDL 626
           ++FG +IPT++EG+PSE+LDP+N+W DK ++K TL+KL  LFK+NF+VFAN+K G    L
Sbjct: 601 EIFGFEIPTEIEGIPSEILDPVNSWSDKKAHKDTLVKLGGLFKKNFEVFANHKIGVDGKL 660

Query: 627 ADEIAAAGPNF 637
            +EI AAGP F
Sbjct: 661 TEEILAAGPIF 671



>AT5G65690.1 | chr5:26266477-26269486 FORWARD LENGTH=671
          Length = 670

 Score =  945 bits (2443), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/655 (69%), Positives = 518/655 (79%), Gaps = 25/655 (3%)

Query: 4   AKDGQAWLGTNGYGSRREEDGVCHDDSATPVRANTVDELHSLQRKPQVVEDRHR------ 57
           A+D    + T   G       VC DD A  V   T+DELHSLQ+K        R      
Sbjct: 20  ARDALPRITTEKGGKSPGPADVCQDDIAPRVNFQTIDELHSLQKKRSAPTTPLRDGSASG 79

Query: 58  --------------XXXXXXXXXXXXMTCGIGPKLVNGDPARKKEMAGKAVTHHQHHITV 103
                                     +T   GPKL+ GDP    ++A   VT      ++
Sbjct: 80  VSGTSGPTTPVSSETMLQSVSASLASLTRETGPKLIRGDPTSAAKVAHVPVTP----TSL 135

Query: 104 PTITVSDSDLKFTHVLYNLSPSELYEHAIKYEKGSFITSSGALATLSGAKTGRSPRDKRV 163
           P   VSDS LKFTH+L+NLSP+ELYE AIK+EKGSF+TS+GALATLSGAKTGRSP+DKRV
Sbjct: 136 PAADVSDSGLKFTHILHNLSPAELYEQAIKFEKGSFVTSTGALATLSGAKTGRSPKDKRV 195

Query: 164 VKDETTD-DLWWGKGSPNIEMDEQTFLINRERAVDYLNSLDKVFVNDQFLNWDPNNRIKV 222
           VKD+TT+ +LWWGKGSPNIEMDE+TFL+NRERAVDYLNSLDKVFVNDQ+LNWDP N+IKV
Sbjct: 196 VKDDTTEAELWWGKGSPNIEMDEKTFLVNRERAVDYLNSLDKVFVNDQYLNWDPENKIKV 255

Query: 223 RIISARAYHSLFMHNMCIRPTYEELENFGEPDFTIYNAGQFPCNRYTHYMTSSTSIDLNL 282
           RI+SARAYHSLFMHNMCIRPT EELENFG PDFTIYNAG+FPCNR+THYMTSSTS+D+NL
Sbjct: 256 RIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGKFPCNRFTHYMTSSTSVDINL 315

Query: 283 KRREMVILGTQYAGEMKKGLFSVMHYLMPKKQILSLHSGCNMGRGGDVAXXXXXXXXXXX 342
            RREMVILGTQYAGEMKKGLF VMHYLMPK++ILSLHSGCNMG+ GDVA           
Sbjct: 316 GRREMVILGTQYAGEMKKGLFGVMHYLMPKRKILSLHSGCNMGKDGDVALFFGLSGTGKT 375

Query: 343 XXXXDRNRILIGDDEHCWSDNGISNIEGGCYAKCIDLSQEKEPDIWDAIKFGTVLENVVF 402
               D NR LIGDDEHCWS+ G+SNIEGGCYAKCIDL+++KEPDIW+AIKFGTVLENVVF
Sbjct: 376 TLSTDHNRYLIGDDEHCWSEAGVSNIEGGCYAKCIDLARDKEPDIWNAIKFGTVLENVVF 435

Query: 403 DEHSREVDYTEKSVTENTRAAYPIEYIANAKIPCVGPHPKNVILLACDAFGVLPPVSKLS 462
           DEH+REVDYT+KSVTENTRAAYPIEYI N+KIPCVGPHPKNVILLACDAFGVLPP+SKL+
Sbjct: 436 DEHTREVDYTDKSVTENTRAAYPIEYIPNSKIPCVGPHPKNVILLACDAFGVLPPISKLN 495

Query: 463 HAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTRYAAMLADKMNKHGAT 522
            AQTMYHFISGYTALVAGTE+G+KEP+ATFSACFGAAFIMLHPT+YAAMLA+KM   GAT
Sbjct: 496 LAQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQAQGAT 555

Query: 523 GWLVNTGWIGGSYGVGERISLAYTRKIIDAIHSGELLARSYKKTDVFGLDIPTKVEGVPS 582
           GWLVNTGW GGSYG G RI LAYTRKIIDAIHSG LL  SY+KTD+FGL+IP +VEGVPS
Sbjct: 556 GWLVNTGWSGGSYGTGSRIKLAYTRKIIDAIHSGSLLNASYRKTDIFGLEIPNEVEGVPS 615

Query: 583 ELLDPINTWEDKDSYKLTLLKLSDLFKRNFKVFANYKKGGVSDLADEIAAAGPNF 637
           E+L+PIN W DK +Y+ TLLKL+ LFK NF+ F ++K G    L +EI AAGPNF
Sbjct: 616 EILEPINAWPDKMAYEDTLLKLAGLFKSNFETFTSHKIGDDGKLTEEILAAGPNF 670



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,089,144
Number of extensions: 603818
Number of successful extensions: 1237
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1232
Number of HSP's successfully gapped: 2
Length of query: 637
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 532
Effective length of database: 8,227,889
Effective search space: 4377236948
Effective search space used: 4377236948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)