Os10g0184300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, V0/A0 complex, 116-kDa subunit family protein.
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Os10g0184300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, V0/A0 complex, 116-kDa subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9 | 0.141 | 12.6 | -0.438 | 0.173 | 0.36 | -0.216 | -0.313 | 0.194 | 9.65 | 21.94 | 4028 | -- | -- |
| 9.06 | 0.14 | 12.6 | -0.359 | 0.18 | 0.354 | -0.197 | -- | 0.21 | 9.55 | 21.14 | 3671 | -- | -- |
| 9.18 | 0.141 | 12.6 | -0.434 | 0.174 | 0.358 | -- | -0.277 | 0.197 | 9.61 | 22.01 | 4034 | -- | -- |
| 9.21 | 0.141 | 12.6 | -0.364 | 0.183 | 0.353 | -- | -- | 0.21 | 9.49 | 21.24 | 3725 | -- | -- |
| 10.72 | 0.152 | 12.6 | -0.405 | -- | 0.348 | -- | -0.14 | 0.199 | -- | 21.2 | 4396 | -- | -- |
| 12.41 | 0.165 | 12.6 | -0.215 | 0.153 | -- | -0.229 | -- | 0.279 | 9.03 | -- | -- | -- | -- |
| 12.59 | 0.166 | 12.6 | -0.223 | 0.154 | -- | -- | -- | 0.278 | 8.89 | -- | -- | -- | -- |
| 10.73 | 0.153 | 12.6 | -0.386 | -- | 0.354 | -- | -- | 0.206 | -- | 19.67 | 4421 | -- | -- |
| 11.85 | 0.16 | 12.6 | -- | 0.165 | 0.194 | -- | -- | 0.343 | 9.52 | 28 | 4222 | -- | -- |
| 13.95 | 0.175 | 12.6 | -0.223 | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
| 13.9 | 0.174 | 12.6 | -- | 0.154 | -- | -- | -- | 0.303 | 9 | -- | -- | -- | -- |
| 13.14 | 0.169 | 12.6 | -- | -- | 0.197 | -- | -- | 0.333 | -- | 29.2 | 5702 | -- | -- |
| 15.26 | 0.182 | 12.6 | -- | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.66 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 8 | 8.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 10 | 8.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 13 | 8.87 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 19 | 8.88 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 30 | 8.90 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 106 | 8.94 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 108 | 8.95 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 127 | 8.95 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 11 |
| 138 | 8.95 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 146 | 8.96 | temperature | 20 | 4320 | > th | dose dependent | sin | 20 | NA |
| 184 | 8.97 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 210 | 8.97 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 217 | 8.98 | temperature | 10 | 4320 | > th | dose dependent | sin | 19 | NA |
| 340 | 9.01 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 341 | 9.01 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 379 | 9.02 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 380 | 9.02 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 382 | 9.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 393 | 9.02 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 429 | 9.03 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 526 | 9.05 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 527 | 9.05 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 528 | 9.05 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 529 | 9.05 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 556 | 9.05 | temperature | 25 | 4320 | > th | dose dependent | sin | 7 | NA |
| 562 | 9.05 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 591 | 9.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 16 |
| 608 | 9.06 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 667 | 9.07 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 674 | 9.07 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 720 | 9.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 18 |
| 741 | 9.08 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 747 | 9.08 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 752 | 9.08 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 815 | 9.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 816 | 9.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 23 |
| 817 | 9.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 923 | 9.10 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 999 | 9.11 | temperature | 30 | 4320 | > th | dose independent | rect. | 18 | 22 |
| 1000 | 9.11 | temperature | 30 | 4320 | < th | dose independent | rect. | 18 | 22 |