Os10g0178200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os10g0178200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.78 | 0.289 | 10.6 | -0.6 | 0.412 | -0.935 | 0.223 | 0.648 | -0.155 | 8.9 | 27.54 | 26 | -- | -- |
| 38.4 | 0.289 | 10.5 | -0.488 | 0.413 | -0.976 | 0.148 | -- | -0.128 | 8.73 | 27.33 | 25 | -- | -- |
| 37.93 | 0.287 | 10.6 | -0.577 | 0.412 | -0.933 | -- | 0.558 | -0.15 | 8.87 | 27.46 | 25 | -- | -- |
| 38.42 | 0.289 | 10.5 | -0.485 | 0.41 | -0.961 | -- | -- | -0.129 | 8.83 | 27.27 | 25 | -- | -- |
| 46.87 | 0.321 | 10.6 | -0.587 | -- | -1.04 | -- | 0.503 | -0.166 | -- | 27.4 | 21 | -- | -- |
| 51.62 | 0.337 | 10.5 | -0.255 | 0.538 | -- | 0.0662 | -- | 0.0817 | 10.9 | -- | -- | -- | -- |
| 51.63 | 0.336 | 10.5 | -0.253 | 0.538 | -- | -- | -- | 0.0819 | 10.9 | -- | -- | -- | -- |
| 47.27 | 0.322 | 10.6 | -0.503 | -- | -1.06 | -- | -- | -0.147 | -- | 27.13 | 21 | -- | -- |
| 43.96 | 0.31 | 10.5 | -- | 0.415 | -0.762 | -- | -- | -0.0366 | 9.46 | 27.11 | 25 | -- | -- |
| 69.57 | 0.39 | 10.5 | -0.264 | -- | -- | -- | -- | 0.0783 | -- | -- | -- | -- | -- |
| 53.32 | 0.342 | 10.5 | -- | 0.54 | -- | -- | -- | 0.11 | 10.9 | -- | -- | -- | -- |
| 53.4 | 0.341 | 10.5 | -- | -- | -0.922 | -- | -- | -0.064 | -- | 27.27 | 9 | -- | -- |
| 71.41 | 0.394 | 10.5 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 38.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 3 | 38.62 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 5 | 38.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 7 | 38.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 8 | 38.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 11 | 39.04 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 13 | 39.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 14 | 39.11 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 18 | 39.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 19 | 39.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 25 | 39.34 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 27 | 39.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 29 | 39.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 39 | 39.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 59 | 39.66 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 75 | 39.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 79 | 39.74 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 84 | 39.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 108 | 39.94 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 113 | 39.96 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 116 | 39.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 126 | 40.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 203 | 40.14 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 210 | 40.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 229 | 40.20 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 233 | 40.20 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 240 | 40.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 283 | 40.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 294 | 40.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 371 | 40.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 396 | 40.41 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 415 | 40.43 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 455 | 40.47 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 23 |
| 614 | 40.62 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 667 | 40.67 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 669 | 40.67 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 700 | 40.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 734 | 40.72 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 735 | 40.73 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 747 | 40.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 786 | 40.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 843 | 40.81 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 857 | 40.82 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 858 | 40.82 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 893 | 40.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 905 | 40.85 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 944 | 40.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |