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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0159700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HSP20-like chaperone domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.97 (0.0924) R2 : 0.628
β1 : -9.91 (0.632) R2dD : 1.78 R2D : 0.115
β2 : 0.685 (0.153) R2dC : 0.0168 R2C : -0.0408
β3 : 3.7 (0.416) R2dE : 0.233 R2E : -0.306
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -22.5 (3.08) R2dD*E : 0.426 R2D*E : -1.05
γ1 : -0.592 (0.18) R2dN8 : 0.0236 R2N8 : -0.108
σ : 1.11
deviance : 563.67
__
_____
C
peak time of C : 4.62
E
wheather : temperature
threshold : 24.4
memory length : 4432
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.57
open length of G : 2.54

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
561.16 1.11 5.97 -9.97 0.696 3.63 1.09 -22.3 -0.609 4.62 24.4 4420 6.9 2.27
635.11 1.17 5.57 -7.01 0.72 1.71 0.916 -- -0.228 4.5 9.341 47520 5.15 0.276
563.67 1.11 5.97 -9.91 0.685 3.7 -- -22.5 -0.592 4.62 24.4 4432 6.57 2.54
634.74 1.17 5.58 -6.97 0.771 1.6 -- -- -0.239 5.12 8.237 47520 5.5 0.0167
588.39 1.13 5.97 -9.89 -- 3.76 -- -22.5 -0.566 -- 24.34 4443 6.43 2.48
659.99 1.2 5.43 -5.33 0.785 -- 0.85 -- 0.398 4.96 -- -- -- --
661.74 1.2 5.43 -5.33 0.794 -- -- -- 0.394 5.15 -- -- -- --
657.26 1.19 5.52 -6.91 -- 1.65 -- -- -0.261 -- -11.88 39114 3.05 4.35
936.9 1.43 5.06 -- 0.788 -3.51 -- -- 2.05 4.99 0.6187 47520 8.72 0.831
694.71 1.23 5.44 -5.3 -- -- -- -- 0.414 -- -- -- -- --
1410.12 1.76 5.3 -- 0.703 -- -- -- 0.987 5.42 -- -- -- --
963.68 1.45 5.1 -- -- -3.39 -- -- 2.06 -- 18.07 47520 8.95 0.994
1435.85 1.77 5.31 -- -- -- -- -- 1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 529.18 temperature 25 43200 > th dose dependent rect. 8 2
4 529.67 temperature 25 43200 > th dose dependent rect. 5 6
22 530.62 temperature 30 43200 > th dose independent rect. 11 1
23 530.67 temperature 30 43200 < th dose independent rect. 11 1
38 531.25 temperature 25 43200 > th dose independent rect. 5 4
43 531.44 temperature 30 43200 < th dose independent rect. 10 5
45 531.48 temperature 25 43200 < th dose independent rect. 4 5
49 531.51 temperature 25 43200 > th dose dependent sin 8 NA
54 531.60 temperature 30 43200 > th dose independent rect. 10 5
66 531.73 temperature 30 43200 < th dose independent rect. 24 16
73 531.74 temperature 30 43200 < th dose independent rect. 5 11
74 531.74 temperature 30 43200 < th dose independent rect. 3 13
116 531.89 temperature 25 43200 > th dose independent rect. 1 9
142 532.08 temperature 30 43200 < th dose independent sin 2 NA
170 532.17 temperature 25 43200 < th dose independent rect. 24 10
175 532.17 temperature 30 43200 < th dose independent rect. 10 18
176 532.17 temperature 30 43200 < th dose independent rect. 10 20
182 532.18 temperature 30 43200 < th dose independent rect. 10 12
183 532.18 temperature 30 43200 < th dose independent rect. 10 15
188 532.19 temperature 30 43200 > th dose independent sin 1 NA
287 532.32 temperature 30 43200 < th dose independent no NA NA
293 532.32 temperature 30 43200 < th dose independent rect. 2 20
294 532.32 temperature 30 43200 < th dose independent rect. 5 20
301 532.32 temperature 30 43200 < th dose independent rect. 3 22
302 532.32 temperature 30 43200 < th dose independent rect. 5 22
414 532.37 temperature 30 43200 < th dose independent rect. 14 23
417 532.38 temperature 30 43200 > th dose independent no NA NA
523 532.42 temperature 30 43200 > th dose independent rect. 14 23
902 534.18 temperature 30 43200 > th dose dependent rect. 14 2
904 534.19 temperature 25 43200 > th dose dependent no NA NA
912 534.22 temperature 25 43200 > th dose dependent rect. 3 23
952 534.33 temperature 25 43200 > th dose dependent rect. 21 23