Os10g0148000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os10g0148000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.11 | 0.298 | 3.19 | 0.0133 | 0.151 | -0.357 | -0.226 | -0.11 | -0.0141 | 8.42 | 1015 | 4198 | -- | -- |
| 40.1 | 0.295 | 3.19 | 0.0198 | 0.148 | -0.338 | -0.247 | -- | -0.00875 | 8.33 | 1015 | 4222 | -- | -- |
| 40.26 | 0.296 | 3.19 | 0.0147 | 0.152 | -0.35 | -- | -0.0865 | -0.0113 | 8.38 | 1015 | 4210 | -- | -- |
| 40.27 | 0.296 | 3.19 | 0.0206 | 0.148 | -0.338 | -- | -- | -0.00959 | 8.68 | 1015 | 4222 | -- | -- |
| 41.53 | 0.3 | 3.19 | 0.0043 | -- | -0.345 | -- | -0.0983 | -0.0105 | -- | 1015 | 4210 | -- | -- |
| 43.62 | 0.31 | 3.2 | 0.0188 | 0.141 | -- | -0.236 | -- | -0.0537 | 8.76 | -- | -- | -- | -- |
| 43.8 | 0.31 | 3.2 | 0.0114 | 0.141 | -- | -- | -- | -0.0535 | 9.01 | -- | -- | -- | -- |
| 41.54 | 0.3 | 3.19 | 0.0135 | -- | -0.338 | -- | -- | -0.00775 | -- | 1015 | 4222 | -- | -- |
| 40.27 | 0.296 | 3.19 | -- | 0.15 | -0.345 | -- | -- | -0.0122 | 8.67 | 1015 | 4222 | -- | -- |
| 44.94 | 0.313 | 3.2 | 0.0112 | -- | -- | -- | -- | -0.0527 | -- | -- | -- | -- | -- |
| 43.8 | 0.31 | 3.2 | -- | 0.141 | -- | -- | -- | -0.0548 | 9.01 | -- | -- | -- | -- |
| 41.52 | 0.3 | 3.19 | -- | -- | -0.339 | -- | -- | -0.0117 | -- | 1014 | 4228 | -- | -- |
| 44.95 | 0.313 | 3.2 | -- | -- | -- | -- | -- | -0.0539 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.90 | humidity | 70.0 | 90 | < th | dose independent | rect. | 17 | 1 |
| 15 | 38.92 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 31 | 39.01 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 42 | 39.01 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 91 | 39.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 95 | 39.64 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 96 | 39.64 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 97 | 39.69 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 98 | 39.69 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 102 | 39.69 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 118 | 39.73 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 5 |
| 119 | 39.73 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 5 |
| 121 | 39.74 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 123 | 39.75 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 144 | 39.79 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 173 | 39.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 179 | 39.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 183 | 39.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 187 | 39.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 188 | 39.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 194 | 39.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 204 | 39.87 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 211 | 39.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 220 | 39.89 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 266 | 39.93 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 315 | 39.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 341 | 39.97 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 363 | 39.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 384 | 40.00 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 1 | NA |
| 605 | 40.12 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 614 | 40.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 654 | 40.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 700 | 40.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 709 | 40.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 760 | 40.19 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 790 | 40.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | no | NA | NA |
| 811 | 40.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 20 |
| 889 | 40.23 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 890 | 40.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 905 | 40.23 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 916 | 40.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 917 | 40.23 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 940 | 40.23 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 19 | 20 |
| 942 | 40.24 | atmosphere | 1015.0 | 4320 | > th | dose independent | no | NA | NA |
| 966 | 40.24 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 15 | 23 |