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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0147200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Thaumatin-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.69 (0.069) R2 : 0.235
β1 : 1.23 (0.256) R2dD : 0.042 R2D : -0.00696
β2 : 1.3 (0.176) R2dC : 0.093 R2C : 0.0806
β3 : 1.1 (0.254) R2dE : 0.0342 R2E : 0.00996
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6.02 (0.833) R2dD*E : 0.0927 R2D*E : 0.0654
γ1 : 0.528 (0.151) R2dN8 : 0.0295 R2N8 : -0.00847
σ : 1.27
deviance : 749.38
__
_____
C
peak time of C : 4.58
E
wheather : radiation
threshold : 13.96
memory length : 1481
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12
open length of G : 0.121

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
755.06 1.29 4.68 1.24 1.31 0.833 0.165 -5.71 0.554 4.52 18.75 1456 12 0.0917
790.72 1.31 4.67 1.38 1.34 3.02 0.505 -- 0.526 4.78 2.04 1652 12 0.0343
749.38 1.27 4.69 1.23 1.3 1.1 -- -6.02 0.528 4.58 13.96 1481 12 0.121
785.34 1.31 4.81 1.16 1.1 2.52 -- -- 0.327 4.99 6.41 1615 11.9 0.434
838.8 1.35 4.71 1.23 -- 1 -- -6.13 0.531 -- 13.96 1496 12 0.0848
873.99 1.39 4.78 0.734 1.27 -- 0.455 -- 0.233 4.68 -- -- -- --
874.48 1.38 4.78 0.732 1.28 -- -- -- 0.23 4.77 -- -- -- --
865.15 1.37 4.75 1.34 -- 3.06 -- -- 0.445 -- 6.3 1921 11.9 0.444
819.32 1.33 4.8 -- 1.29 2.55 -- -- 0.227 4.75 6.469 1557 11.9 0.38
960.68 1.45 4.79 0.78 -- -- -- -- 0.264 -- -- -- -- --
888.61 1.39 4.8 -- 1.29 -- -- -- 0.149 4.76 -- -- -- --
907.77 1.4 4.79 -- -- 2.51 -- -- 0.265 -- 6.311 1606 11.9 0.364
976.74 1.46 4.81 -- -- -- -- -- 0.177 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 777.42 humidity 90 14400 < th dose dependent rect. 5 2
2 777.63 radiation 10 1440 > th dose independent rect. 11 2
5 782.42 wind 3 4320 < th dose independent rect. 4 1
7 784.15 wind 3 14400 < th dose dependent rect. 1 1
9 786.24 radiation 20 1440 < th dose dependent rect. 12 1
10 786.29 radiation 1 1440 < th dose independent rect. 11 2
11 786.29 radiation 1 1440 < th dose dependent rect. 11 2
12 786.41 radiation 1 1440 < th dose independent rect. 9 4
13 786.41 radiation 1 1440 < th dose dependent rect. 9 4
14 786.60 radiation 10 720 < th dose dependent rect. 11 16
18 787.03 humidity 50 14400 > th dose dependent rect. 4 3
27 787.87 wind 1 43200 < th dose dependent rect. 23 1
34 788.25 radiation 1 1440 > th dose independent rect. 8 6
38 788.79 humidity 70 14400 < th dose dependent rect. 7 1
43 789.04 wind 3 14400 > th dose independent rect. 1 13
45 789.28 wind 1 43200 < th dose independent rect. 20 4
50 789.44 wind 3 14400 < th dose independent rect. 1 13
52 789.58 temperature 25 1440 < th dose independent rect. 24 2
55 789.60 wind 3 14400 < th dose independent rect. 1 7
58 789.72 wind 3 14400 > th dose independent rect. 1 9
59 789.72 wind 3 14400 > th dose independent rect. 24 15
63 789.89 wind 3 14400 > th dose independent rect. 17 15
69 790.04 wind 3 14400 > th dose independent sin 5 NA
82 790.21 wind 3 14400 < th dose independent rect. 24 15
95 790.65 wind 3 14400 < th dose independent rect. 17 15
97 790.74 wind 3 14400 < th dose independent sin 5 NA
115 791.06 humidity 80 1440 > th dose independent rect. 11 2
143 791.72 humidity 80 720 < th dose independent rect. 19 20
146 791.86 wind 1 14400 < th dose independent rect. 1 1
153 791.98 wind 1 43200 < th dose independent rect. 10 3
156 792.03 wind 1 43200 < th dose independent rect. 22 2
164 792.14 temperature 25 1440 > th dose independent rect. 24 1
175 792.26 wind 3 14400 < th dose dependent rect. 5 1
176 792.27 temperature 25 1440 < th dose independent rect. 23 7
200 792.75 humidity 80 720 < th dose independent rect. 12 1
206 792.90 wind 1 14400 > th dose independent rect. 1 1
240 793.53 wind 1 43200 < th dose independent rect. 18 6
264 794.01 wind 3 14400 > th dose independent rect. 1 3
266 794.04 wind 3 4320 > th dose independent rect. 4 1
295 794.40 humidity 60 14400 > th dose independent rect. 20 14
307 794.52 wind 1 43200 > th dose independent rect. 10 3
311 794.54 wind 1 43200 < th dose dependent rect. 18 6
324 794.72 wind 1 43200 < th dose dependent rect. 20 4
388 795.65 radiation 1 720 > th dose independent rect. 18 1
437 796.04 wind 3 14400 < th dose dependent rect. 1 6
451 796.26 humidity 80 720 > th dose independent rect. 8 20
454 796.30 wind 1 43200 < th dose independent rect. 18 9
467 796.59 humidity 60 14400 > th dose independent rect. 6 4
469 796.60 humidity 60 14400 > th dose independent rect. 23 11
475 796.63 wind 5 14400 < th dose dependent rect. 24 15
479 796.66 humidity 60 14400 > th dose independent rect. 3 7
496 796.88 wind 5 14400 < th dose dependent sin 5 NA
505 796.97 wind 1 43200 < th dose dependent rect. 10 3
506 796.98 humidity 90 43200 < th dose independent rect. 1 1
520 797.18 wind 1 43200 > th dose independent rect. 20 3
531 797.32 radiation 10 43200 < th dose dependent rect. 17 13
532 797.34 temperature 25 1440 > th dose independent rect. 23 7
565 797.77 humidity 70 14400 < th dose independent rect. 6 2
595 798.03 wind 5 14400 < th dose dependent rect. 5 8
600 798.17 humidity 90 43200 > th dose independent rect. 21 8
607 798.27 humidity 90 43200 < th dose independent rect. 21 8
628 798.42 humidity 90 43200 > th dose independent rect. 23 4
645 798.60 humidity 90 43200 < th dose independent rect. 23 4
661 798.74 humidity 90 43200 > th dose independent rect. 1 2
676 798.84 wind 1 14400 > th dose dependent rect. 5 5
681 798.87 humidity 60 14400 > th dose independent rect. 9 1
715 799.18 wind 5 14400 < th dose dependent rect. 18 13
733 799.28 radiation 1 1440 > th dose independent rect. 9 1
734 799.28 wind 1 43200 < th dose independent rect. 20 7
738 799.29 wind 1 14400 > th dose dependent rect. 1 9
741 799.32 humidity 80 720 < th dose dependent rect. 19 8
757 799.42 wind 3 4320 > th dose dependent rect. 8 1
775 799.54 wind 1 14400 > th dose dependent rect. 6 1
784 799.60 wind 7 14400 < th dose dependent rect. 5 5
811 799.79 wind 1 14400 > th dose dependent sin 5 NA
840 799.99 humidity 90 43200 > th dose dependent rect. 2 1
850 800.05 humidity 90 43200 > th dose dependent rect. 23 1
852 800.06 humidity 90 43200 > th dose dependent rect. 23 4
867 800.12 humidity 80 720 > th dose independent rect. 11 17
878 800.20 wind 1 43200 > th dose independent rect. 18 5
884 800.22 humidity 60 14400 < th dose independent rect. 20 14
952 800.54 radiation 1 43200 > th dose dependent rect. 17 12
963 800.62 humidity 60 14400 < th dose independent rect. 9 1