BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0147200 Os10g0147200|AK111104
(102 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282 72 6e-14
AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346 67 1e-12
AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302 67 1e-12
AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317 63 4e-11
AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331 60 2e-10
AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209 60 3e-10
AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421 59 4e-10
AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261 59 6e-10
AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254 55 7e-09
AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240 52 7e-08
AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247 52 7e-08
AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247 51 1e-07
AT4G18250.1 | chr4:10087343-10091963 REVERSE LENGTH=854 51 1e-07
AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245 49 6e-07
AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265 49 6e-07
AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245 49 6e-07
AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666 48 1e-06
AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357 48 1e-06
AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295 48 1e-06
AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800 47 2e-06
AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248 46 3e-06
>AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282
Length = 281
Score = 72.0 bits (175), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 2 FFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNPQAAGLQQLNDT 61
FFK ACPRAYSYAYDD TST+TCA GA DY I FCP TS K G A L +N +
Sbjct: 213 FFKHACPRAYSYAYDDKTSTYTCATGA-DYFIIFCPPPYTSEKLLGSRKDGATLPLVNKS 271
Query: 62 MVYF 65
M++
Sbjct: 272 MIHL 275
>AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346
Length = 345
Score = 67.4 bits (163), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 3/50 (6%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNP 50
E FKAACPR+YSYAYDD+TSTFTCA G DY +TFCP++P S KS+ +P
Sbjct: 211 EMFKAACPRSYSYAYDDATSTFTCAGG--DYTVTFCPSSP-SQKSTSYSP 257
>AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302
Length = 301
Score = 67.4 bits (163), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNPQ 51
+FFK ACPRAYSYAYDD TSTFTC G DY ITFCP+ SVKS+ + Q
Sbjct: 216 QFFKNACPRAYSYAYDDGTSTFTC--GGADYVITFCPSPNPSVKSATKGVQ 264
>AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317
Length = 316
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQN 49
FK+ACPRAYSYAYDD +STFTCA + +Y ITFCP+ TS+KS+ ++
Sbjct: 210 RIFKSACPRAYSYAYDDKSSTFTCAK-SPNYVITFCPSPNTSLKSAEEH 257
>AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331
Length = 330
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 2 FFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSS 46
FK ACPRAYSYAYDD +STFTCA + +Y ITFCP TS KSS
Sbjct: 214 MFKTACPRAYSYAYDDQSSTFTCAE-SPNYVITFCPTPNTSQKSS 257
>AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209
Length = 208
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNP 50
+ FK+ACP++YSYAYDD+TSTFTC+ DY ITFCP +S+KSS + P
Sbjct: 104 QVFKSACPKSYSYAYDDATSTFTCSGA--DYTITFCPKL-SSLKSSKEPP 150
>AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421
Length = 420
Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 2 FFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNPQAAGLQQLNDT 61
FK ACPRAYSYA+DD TSTFTC A++YAI FCP S +P + QL
Sbjct: 218 IFKRACPRAYSYAFDDGTSTFTCK--ASEYAIIFCPGRVKRPDSLNSDPPSPPQNQLGQP 275
Query: 62 M 62
M
Sbjct: 276 M 276
>AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261
Length = 260
Score = 58.5 bits (140), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%), Gaps = 2/40 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAP 40
E FK+ACPR+YSYA+DD+TSTFTC DY ITFCP+ P
Sbjct: 222 EIFKSACPRSYSYAFDDATSTFTCT--DADYTITFCPSLP 259
>AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254
Length = 253
Score = 55.1 bits (131), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 2 FFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPA 38
FFK CP AYSYAYDD TSTFTC+ DY ITFCP+
Sbjct: 216 FFKKTCPTAYSYAYDDGTSTFTCS--GADYVITFCPS 250
>AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240
Length = 239
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCP 37
FK ACP AYSYAYDD TSTFTC +Y ITFCP
Sbjct: 205 RIFKNACPDAYSYAYDDETSTFTCT--GANYEITFCP 239
>AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247
Length = 246
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Query: 2 FFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCP 37
FK+ACP AYSYAYDD+TSTFTC ++Y I+FCP
Sbjct: 210 MFKSACPGAYSYAYDDATSTFTCT--GSNYLISFCP 243
>AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247
Length = 246
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCP 37
FK ACP AYSYAYDD++STFTC ++Y ITFCP
Sbjct: 209 SMFKNACPSAYSYAYDDASSTFTCT--GSNYLITFCP 243
>AT4G18250.1 | chr4:10087343-10091963 REVERSE LENGTH=854
Length = 853
Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 3 FKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAA-PTSVKSS-GQNPQ 51
F ACP AYSY + + STFTC +TDY ITFCP++ P + SS Q PQ
Sbjct: 403 FDRACPSAYSYPFSGNNSTFTC-TNSTDYVITFCPSSIPNTTSSSMAQLPQ 452
>AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245
Length = 244
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCP 37
+ FK ACP+AYSYAYDD TS TC+ +Y +TFCP
Sbjct: 206 KIFKVACPKAYSYAYDDPTSIATCS--KANYIVTFCP 240
>AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265
Length = 264
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCP 37
+ FK ACP+AYSYAYDD TS TC+ +Y +TFCP
Sbjct: 226 KIFKVACPKAYSYAYDDPTSIATCS--KANYVVTFCP 260
>AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245
Length = 244
Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNP 50
FFK CP AYSY DD TSTFTC T+Y + FCP + S Q P
Sbjct: 189 RFFKQRCPDAYSYPQDDPTSTFTCT--NTNYRVVFCPRSRLGATGSHQLP 236
>AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666
Length = 665
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 3 FKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQNPQAAGLQQ 57
FK CP AYSYAYD+ +TF C + + +Y ITFCP +S+ + Q+
Sbjct: 217 FKNECPLAYSYAYDNENNTFRC-SNSPNYVITFCPNDISSMSQPSKETNGGTKQK 270
>AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357
Length = 356
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFC 36
+ FK ACP AYSYAYDD TS TC A+DY I+FC
Sbjct: 266 KIFKQACPTAYSYAYDDPTSIMTCT--ASDYVISFC 299
>AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295
Length = 294
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCP 37
FKA CP+AYSYA+DDS+S C A+ Y ITFCP
Sbjct: 207 NLFKAICPKAYSYAFDDSSSLNKCR--ASRYVITFCP 241
>AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800
Length = 799
Score = 46.6 bits (109), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 3 FKAACPRAYSYAYDDSTSTFTCAAGATDYAITFCPAAPTSVKSSGQN----PQAAGLQ 56
F CP AYSYAYD S+FTC +++ ITFCP++ T ++ N P+A ++
Sbjct: 334 FNNVCPSAYSYAYDVDNSSFTC-PNFSNFVITFCPSSSTVPEAGNINSSTVPEAGNIK 390
>AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248
Length = 247
Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 1 EFFKAACPRAYSYAYDDSTSTFTCAAGATDYAITFC 36
+ FK ACP AYSYAYDD++STFTC +Y I+FC
Sbjct: 213 KIFKQACPSAYSYAYDDASSTFTCT--NANYEISFC 246
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.127 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,259,957
Number of extensions: 32843
Number of successful extensions: 132
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 22
Length of query: 102
Length of database: 11,106,569
Length adjustment: 72
Effective length of query: 30
Effective length of database: 9,132,617
Effective search space: 273978510
Effective search space used: 273978510
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 104 (44.7 bits)