Os10g0100300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
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Os10g0100300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NAD-dependent epimerase/dehydratase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.93 | 0.506 | 12.8 | -2.86 | 1.46 | -0.509 | 1.13 | -1.04 | -0.284 | 1.86 | 77 | 264 | -- | -- |
| 118.92 | 0.508 | 12.8 | -2.79 | 1.46 | -0.505 | 1.71 | -- | -0.272 | 1.96 | 76.93 | 255 | -- | -- |
| 119.62 | 0.509 | 12.8 | -2.9 | 1.37 | -0.543 | -- | -1.49 | -0.262 | 1.72 | 77 | 230 | -- | -- |
| 129.96 | 0.531 | 12.8 | -2.83 | 1.43 | -0.548 | -- | -- | -0.276 | 1.75 | 76.43 | 263 | -- | -- |
| 174.42 | 0.615 | 12.8 | -2.8 | -- | -1.28 | -- | -1.29 | -0.315 | -- | 77 | 96 | -- | -- |
| 127.64 | 0.53 | 12.8 | -2.83 | 1.86 | -- | 1.84 | -- | -0.289 | 2.42 | -- | -- | -- | -- |
| 139.87 | 0.554 | 12.8 | -2.88 | 1.86 | -- | -- | -- | -0.299 | 2.35 | -- | -- | -- | -- |
| 183.96 | 0.632 | 12.8 | -2.75 | -- | -1.28 | -- | -- | -0.306 | -- | 77.12 | 91 | -- | -- |
| 339.95 | 0.859 | 12.7 | -- | 1.4 | -0.668 | -- | -- | 0.0733 | 1.7 | 70 | 285 | -- | -- |
| 344.48 | 0.867 | 12.8 | -2.8 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 358.26 | 0.885 | 12.7 | -- | 1.8 | -- | -- | -- | 0.0214 | 2.32 | -- | -- | -- | -- |
| 377.67 | 0.905 | 12.7 | -- | -- | -1.28 | -- | -- | 0.0533 | -- | 76 | 62 | -- | -- |
| 551.29 | 1.1 | 12.7 | -- | -- | -- | -- | -- | 0.057 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.69 | humidity | 50 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 3 | 112.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 4 | 112.25 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 18 |
| 9 | 113.03 | humidity | 50 | 30 | > th | dose dependent | rect. | 16 | 20 |
| 13 | 113.23 | humidity | 80 | 270 | < th | dose independent | rect. | 22 | 17 |
| 15 | 113.31 | humidity | 70 | 270 | > th | dose dependent | sin | 2 | NA |
| 21 | 113.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 34 | 113.78 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 2 |
| 40 | 113.96 | humidity | 60 | 30 | > th | dose independent | rect. | 2 | 10 |
| 41 | 113.97 | humidity | 80 | 270 | < th | dose independent | rect. | 8 | 7 |
| 45 | 114.02 | humidity | 80 | 270 | < th | dose independent | rect. | 19 | 21 |
| 51 | 114.09 | humidity | 60 | 10 | > th | dose independent | rect. | 18 | 18 |
| 63 | 114.27 | humidity | 60 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 72 | 114.34 | humidity | 60 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 74 | 114.35 | humidity | 70 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 80 | 114.47 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 6 |
| 82 | 114.47 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 15 |
| 89 | 114.57 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 8 |
| 92 | 114.60 | humidity | 60 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 93 | 114.61 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 10 |
| 94 | 114.61 | humidity | 90 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 119 | 114.74 | humidity | 80 | 270 | < th | dose independent | rect. | 5 | 10 |
| 127 | 114.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 132 | 114.81 | humidity | 80 | 270 | > th | dose independent | sin | 2 | NA |
| 147 | 114.87 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 151 | 114.89 | temperature | 15 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 176 | 114.97 | humidity | 90 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 183 | 115.01 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 12 |
| 184 | 115.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 192 | 115.03 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 12 |
| 197 | 115.06 | temperature | 25 | 10 | < th | dose dependent | sin | 12 | NA |
| 205 | 115.10 | temperature | 25 | 90 | < th | dose dependent | sin | 13 | NA |
| 228 | 115.17 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 12 | 14 |
| 238 | 115.19 | temperature | 25 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 254 | 115.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 255 | 115.23 | humidity | 90 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 268 | 115.27 | humidity | 80 | 270 | > th | dose independent | rect. | 24 | 20 |
| 279 | 115.29 | temperature | 25 | 30 | > th | dose dependent | rect. | 10 | 8 |
| 359 | 115.49 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 12 |
| 373 | 115.52 | temperature | 30 | 10 | < th | dose independent | rect. | 2 | 10 |
| 374 | 115.52 | humidity | 50 | 270 | > th | dose dependent | rect. | 1 | 11 |
| 377 | 115.53 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 7 |
| 420 | 115.64 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 5 |
| 433 | 115.69 | humidity | 60 | 10 | > th | dose independent | rect. | 16 | 20 |
| 447 | 115.72 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 460 | 115.76 | humidity | 80 | 30 | < th | dose independent | rect. | 12 | 6 |
| 497 | 115.85 | temperature | 25 | 10 | > th | dose dependent | sin | 0 | NA |
| 501 | 115.86 | temperature | 30 | 90 | < th | dose independent | rect. | 18 | 1 |
| 514 | 115.89 | humidity | 80 | 270 | > th | dose independent | rect. | 7 | 12 |
| 518 | 115.89 | humidity | 50 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 521 | 115.90 | humidity | 90 | 270 | < th | dose independent | sin | 0 | NA |
| 539 | 115.94 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 12 |
| 553 | 115.97 | temperature | 10 | 10 | > th | dose dependent | sin | 11 | NA |
| 579 | 116.00 | humidity | 70 | 90 | > th | dose dependent | rect. | 9 | 11 |
| 614 | 116.10 | humidity | 90 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 620 | 116.11 | temperature | 15 | 30 | > th | dose dependent | rect. | 18 | 7 |
| 658 | 116.20 | temperature | 30 | 10 | < th | dose independent | rect. | 18 | 18 |
| 671 | 116.23 | humidity | 90 | 270 | < th | dose dependent | sin | 3 | NA |
| 693 | 116.27 | humidity | 70 | 10 | > th | dose independent | rect. | 10 | 13 |
| 798 | 116.43 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 820 | 116.46 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 19 | 23 |
| 842 | 116.49 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 1 |
| 857 | 116.51 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 903 | 116.59 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 4 |
| 974 | 116.69 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 5 |