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Os09g0573100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0189) R2 : 0.335
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.23 (0.0865) R2dE : 0.327 R2E : 0.334
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0195 (0.0415) R2dN8 : 0.000464 R2N8 : 0.0074
σ : 0.351
deviance : 56.64
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C
peak time of C : --
E
wheather : temperature
threshold : 23.85
memory length : 878
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.62 0.299 9.43 -0.968 0.179 -1.37 -0.397 1.51 -0.178 6.85 24.4 737 -- --
43.33 0.307 9.4 -0.732 0.174 -1.58 -0.102 -- -0.113 7.04 23.77 771 -- --
40.96 0.298 9.43 -0.959 0.173 -1.38 -- 1.41 -0.174 6.51 24.28 760 -- --
43.19 0.306 9.4 -0.775 0.0717 -1.69 -- -- -0.123 5.75 23.39 1147 -- --
41.06 0.298 9.44 -1.01 -- -1.43 -- 1.49 -0.187 -- 24.25 1137 -- --
77.44 0.413 9.33 -0.303 0.176 -- -0.16 -- 0.172 2.39 -- -- -- --
77.53 0.412 9.33 -0.299 0.175 -- -- -- 0.173 2.34 -- -- -- --
43.45 0.307 9.4 -0.774 -- -1.69 -- -- -0.12 -- 23.43 1157 -- --
55.39 0.347 9.37 -- 0.16 -1.27 -- -- 0.0142 5.58 23.74 658 -- --
79.35 0.416 9.33 -0.292 -- -- -- -- 0.178 -- -- -- -- --
79.89 0.418 9.33 -- 0.169 -- -- -- 0.207 2.31 -- -- -- --
56.64 0.351 9.37 -- -- -1.23 -- -- 0.0195 -- 23.85 878 -- --
81.59 0.422 9.33 -- -- -- -- -- 0.21 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.04 temperature 10 720 > th dose dependent rect. 12 23
3 40.68 temperature 10 720 > th dose dependent rect. 19 23
4 40.77 temperature 25 720 < th dose dependent rect. 17 23
6 40.80 temperature 15 720 > th dose dependent rect. 14 21
8 40.83 temperature 25 720 < th dose dependent rect. 13 23
12 40.86 temperature 25 720 < th dose dependent no NA NA
14 40.87 temperature 25 720 < th dose dependent rect. 1 23
16 40.87 temperature 25 720 < th dose dependent rect. 4 23
19 40.91 temperature 30 720 < th dose dependent rect. 15 20
20 40.91 temperature 15 720 > th dose dependent rect. 17 22
21 40.91 temperature 15 720 > th dose dependent rect. 14 23
23 40.93 temperature 10 720 > th dose dependent rect. 1 23
33 40.97 temperature 25 720 < th dose dependent rect. 19 23
34 40.97 temperature 25 720 < th dose dependent rect. 21 23
38 40.98 temperature 25 720 < th dose dependent rect. 6 23
40 40.99 temperature 25 720 < th dose dependent rect. 23 23
48 41.05 temperature 25 720 < th dose dependent rect. 10 23
52 41.06 temperature 10 720 > th dose dependent rect. 23 23
59 41.11 temperature 25 720 < th dose dependent rect. 8 23
70 41.20 temperature 10 720 > th dose dependent no NA NA
75 41.22 temperature 10 720 > th dose dependent rect. 10 23
111 41.45 temperature 25 1440 < th dose dependent rect. 17 7
120 41.48 temperature 25 1440 < th dose dependent rect. 21 2
122 41.48 temperature 10 720 > th dose dependent rect. 3 23
186 41.69 temperature 25 1440 < th dose dependent sin 14 NA
196 41.71 temperature 25 1440 < th dose dependent rect. 17 13
229 41.79 temperature 15 720 > th dose dependent rect. 8 23
280 41.91 temperature 10 1440 > th dose dependent rect. 17 15
436 42.18 temperature 10 1440 > th dose dependent sin 12 NA
691 42.56 temperature 25 1440 < th dose dependent rect. 1 12
747 42.64 temperature 25 1440 < th dose dependent rect. 3 8
825 42.75 temperature 10 1440 > th dose dependent rect. 21 2