Os09g0558200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
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Os09g0558200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Homeodomain-like containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.42 | 0.255 | 9.99 | 0.348 | 1.09 | 0.443 | -0.116 | 0.931 | 0.0159 | 6.09 | 0.4172 | 4650 | -- | -- |
| 29.55 | 0.253 | 9.98 | 0.322 | 1.09 | 0.432 | -0.106 | -- | 0.00749 | 6.11 | 1 | 5390 | -- | -- |
| 29.45 | 0.253 | 9.99 | 0.347 | 1.09 | 0.444 | -- | 0.939 | 0.0161 | 6.09 | 0.4136 | 4648 | -- | -- |
| 29.58 | 0.253 | 9.98 | 0.318 | 1.09 | 0.433 | -- | -- | 0.00894 | 6.11 | 1 | 5390 | -- | -- |
| 90.29 | 0.443 | 10 | 0.337 | -- | 0.417 | -- | 0.369 | 0.0283 | -- | 0.6436 | 6005 | -- | -- |
| 33.03 | 0.269 | 9.97 | 0.222 | 1.09 | -- | -0.175 | -- | 0.0553 | 6.1 | -- | -- | -- | -- |
| 33.1 | 0.269 | 9.97 | 0.221 | 1.09 | -- | -- | -- | 0.0559 | 6.1 | -- | -- | -- | -- |
| 90.38 | 0.443 | 10 | 0.334 | -- | 0.416 | -- | -- | 0.0223 | -- | 0.9996 | 5885 | -- | -- |
| 31.91 | 0.263 | 9.98 | -- | 1.09 | 0.365 | -- | -- | -0.00827 | 6.12 | 0.6384 | 5693 | -- | -- |
| 94.16 | 0.453 | 9.98 | 0.251 | -- | -- | -- | -- | 0.0803 | -- | -- | -- | -- | -- |
| 34.38 | 0.274 | 9.97 | -- | 1.09 | -- | -- | -- | 0.0314 | 6.09 | -- | -- | -- | -- |
| 93 | 0.449 | 10 | -- | -- | 0.395 | -- | -- | 0.0042 | -- | 0.001827 | 6005 | -- | -- |
| 95.82 | 0.457 | 9.99 | -- | -- | -- | -- | -- | 0.0524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.69 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 11 | 28.08 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 12 | 28.08 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 13 | 28.08 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 21 | 28.16 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 29 | 28.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 30 | 28.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 31 | 28.24 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 35 | 28.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 36 | 28.28 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 38 | 28.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 42 | 28.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 44 | 28.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 47 | 28.32 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 48 | 28.33 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 50 | 28.33 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 54 | 28.34 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 56 | 28.34 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 62 | 28.36 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 64 | 28.37 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 69 | 28.38 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 74 | 28.39 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 75 | 28.39 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 77 | 28.39 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 82 | 28.40 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 86 | 28.40 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 96 | 28.42 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 114 | 28.44 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 146 | 28.46 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 154 | 28.47 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 190 | 28.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 191 | 28.50 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 204 | 28.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 208 | 28.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 290 | 28.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 312 | 28.56 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 332 | 28.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 359 | 28.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 380 | 28.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 384 | 28.59 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 444 | 28.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 479 | 28.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 506 | 28.63 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 528 | 28.64 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 620 | 28.67 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 653 | 28.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 656 | 28.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 668 | 28.68 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 686 | 28.69 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 689 | 28.69 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 694 | 28.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 708 | 28.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 789 | 28.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 849 | 28.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 850 | 28.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 911 | 28.76 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 927 | 28.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |