Os09g0553700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PRLI-interacting factor A (Fragment).
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Os09g0553700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PRLI-interacting factor A (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.75 | 0.414 | 13.2 | 1.35 | 1.67 | 0.753 | 0.619 | 1.58 | 0.495 | 4.71 | 0.1042 | 4377 | -- | -- |
| 79.69 | 0.416 | 13.2 | 1.43 | 1.68 | 0.825 | 0.672 | -- | 0.502 | 4.71 | 0.2173 | 4415 | -- | -- |
| 78.73 | 0.413 | 13.2 | 1.35 | 1.67 | 0.758 | -- | 1.63 | 0.497 | 4.68 | 0.1115 | 4389 | -- | -- |
| 80.81 | 0.419 | 13.2 | 1.42 | 1.68 | 0.843 | -- | -- | 0.495 | 4.69 | 0.2524 | 4415 | -- | -- |
| 226.53 | 0.701 | 13.2 | 1.38 | -- | 0.706 | -- | 2.41 | 0.529 | -- | 0.3042 | 3690 | -- | -- |
| 87.82 | 0.439 | 13.2 | 1.57 | 1.68 | -- | 0.766 | -- | 0.431 | 4.73 | -- | -- | -- | -- |
| 89.33 | 0.443 | 13.2 | 1.56 | 1.68 | -- | -- | -- | 0.427 | 4.69 | -- | -- | -- | -- |
| 229.43 | 0.705 | 13.2 | 1.38 | -- | 0.809 | -- | -- | 0.526 | -- | 0.4556 | 2377 | -- | -- |
| 123.01 | 0.517 | 13.2 | -- | 1.69 | 1.36 | -- | -- | 0.394 | 4.68 | 0.177 | 2457 | -- | -- |
| 239.2 | 0.723 | 13.2 | 1.63 | -- | -- | -- | -- | 0.471 | -- | -- | -- | -- | -- |
| 153.6 | 0.58 | 13.3 | -- | 1.71 | -- | -- | -- | 0.253 | 4.66 | -- | -- | -- | -- |
| 271.85 | 0.768 | 13.2 | -- | -- | 1.51 | -- | -- | 0.438 | -- | 0.1113 | 2260 | -- | -- |
| 308.89 | 0.82 | 13.3 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.09 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 11 | 73.70 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 18 | 74.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 19 | 74.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 20 | 74.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 22 | 74.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 17 |
| 30 | 74.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 76 | 74.52 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 78 | 74.53 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 80 | 74.54 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 5 | NA |
| 86 | 74.58 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 5 | NA |
| 87 | 74.58 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 88 | 74.60 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 96 | 74.63 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 105 | 74.67 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 109 | 74.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 111 | 74.70 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 115 | 74.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 131 | 74.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 133 | 74.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 134 | 74.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 140 | 74.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 142 | 74.84 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 152 | 74.90 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 154 | 74.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 159 | 74.93 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 164 | 74.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 10 |
| 181 | 74.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 182 | 75.00 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 187 | 75.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 190 | 75.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 10 |
| 198 | 75.03 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 221 | 75.10 | humidity | 80.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 223 | 75.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 229 | 75.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 232 | 75.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 247 | 75.14 | humidity | 80.0 | 90 | > th | dose independent | sin | 2 | NA |
| 248 | 75.14 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 8 |
| 272 | 75.19 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 278 | 75.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 288 | 75.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 309 | 75.27 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 334 | 75.32 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 351 | 75.35 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 398 | 75.44 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 14 |
| 420 | 75.47 | humidity | 60.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 421 | 75.47 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 422 | 75.48 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 444 | 75.52 | humidity | 80.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 445 | 75.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 450 | 75.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 454 | 75.52 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 481 | 75.57 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 536 | 75.65 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 553 | 75.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 565 | 75.69 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 8 |
| 572 | 75.70 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 22 |
| 604 | 75.74 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 608 | 75.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 621 | 75.76 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 630 | 75.77 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 658 | 75.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 666 | 75.79 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 19 | 22 |
| 688 | 75.81 | humidity | 70.0 | 14400 | > th | dose dependent | no | NA | NA |
| 689 | 75.81 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 8 | 19 |
| 695 | 75.81 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 699 | 75.82 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 705 | 75.82 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 724 | 75.83 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 729 | 75.83 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 757 | 75.85 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 758 | 75.85 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 774 | 75.86 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 786 | 75.87 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 791 | 75.87 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 802 | 75.88 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 827 | 75.89 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 843 | 75.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 849 | 75.91 | humidity | 80.0 | 10 | > th | dose independent | sin | 2 | NA |
| 875 | 75.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 14 |
| 890 | 75.93 | radiation | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 917 | 75.95 | humidity | 80.0 | 14400 | > th | dose independent | no | NA | NA |
| 918 | 75.95 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |