Os09g0538700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os09g0538700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.99 | 0.481 | 7.61 | 0.163 | 1.85 | 0.907 | 0.958 | -0.379 | 0.107 | 23 | 68 | 1208 | -- | -- |
| 105.24 | 0.478 | 7.61 | 0.21 | 1.85 | 0.893 | 0.894 | -- | 0.111 | 23 | 68.01 | 1200 | -- | -- |
| 108.54 | 0.485 | 7.61 | 0.159 | 1.84 | 0.905 | -- | -0.00857 | 0.117 | 23 | 68.3 | 1200 | -- | -- |
| 108.53 | 0.485 | 7.61 | 0.163 | 1.84 | 0.913 | -- | -- | 0.115 | 23 | 68.18 | 1203 | -- | -- |
| 235.11 | 0.714 | 7.61 | 0.0716 | -- | 2.23 | -- | 0.2 | -0.0952 | -- | 75 | 967 | -- | -- |
| 133.38 | 0.541 | 7.61 | 0.397 | 2.06 | -- | 1.11 | -- | 0.119 | 23.2 | -- | -- | -- | -- |
| 138.62 | 0.551 | 7.61 | 0.353 | 2.05 | -- | -- | -- | 0.116 | 23.2 | -- | -- | -- | -- |
| 235 | 0.714 | 7.6 | 0.129 | -- | 2.23 | -- | -- | -0.053 | -- | 75 | 967 | -- | -- |
| 109.21 | 0.487 | 7.61 | -- | 1.83 | 0.938 | -- | -- | 0.0973 | 23 | 68.3 | 1200 | -- | -- |
| 401.44 | 0.936 | 7.56 | 0.402 | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
| 141.91 | 0.557 | 7.62 | -- | 2.06 | -- | -- | -- | 0.0763 | 23.2 | -- | -- | -- | -- |
| 235.43 | 0.715 | 7.61 | -- | -- | 2.24 | -- | -- | -0.0757 | -- | 74.8 | 967 | -- | -- |
| 405.7 | 0.94 | 7.57 | -- | -- | -- | -- | -- | 0.0886 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.76 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 5 | 99.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 6 | 99.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 8 | 100.62 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 11 | 101.45 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 13 | 101.48 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 18 | 101.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 19 | 101.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 38 | 102.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 39 | 102.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 42 | 102.60 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 43 | 102.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 46 | 102.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 47 | 102.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 49 | 102.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 57 | 103.26 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 60 | 103.38 | humidity | 50.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 64 | 103.48 | humidity | 70.0 | 720 | > th | dose independent | sin | 11 | NA |
| 91 | 104.41 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 93 | 104.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 104 | 104.67 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 107 | 104.72 | wind | 5.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 109 | 104.75 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 8 |
| 112 | 104.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 124 | 105.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 125 | 105.15 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 130 | 105.17 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 15 |
| 132 | 105.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 14 |
| 136 | 105.25 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 139 | 105.29 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 144 | 105.35 | wind | 7.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 150 | 105.41 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 151 | 105.42 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 165 | 105.60 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 187 | 105.90 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 199 | 106.03 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 219 | 106.22 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 240 | 106.46 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 243 | 106.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 248 | 106.56 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 250 | 106.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 251 | 106.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 253 | 106.60 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 264 | 106.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 266 | 106.63 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 273 | 106.68 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 289 | 106.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 305 | 106.97 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 306 | 106.97 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 321 | 107.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 323 | 107.01 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 10 |
| 327 | 107.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 328 | 107.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 336 | 107.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 346 | 107.11 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 357 | 107.17 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 13 | 21 |
| 374 | 107.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 377 | 107.31 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 381 | 107.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 383 | 107.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 384 | 107.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 387 | 107.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 388 | 107.32 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 394 | 107.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 402 | 107.36 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 403 | 107.36 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 423 | 107.50 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 437 | 107.58 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 440 | 107.59 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 450 | 107.61 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 454 | 107.62 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 14 | 5 |
| 457 | 107.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 465 | 107.68 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 476 | 107.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 9 |
| 477 | 107.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 492 | 107.77 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 497 | 107.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 499 | 107.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 500 | 107.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 503 | 107.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 504 | 107.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 508 | 107.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 538 | 107.85 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 558 | 107.90 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 578 | 107.95 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 596 | 107.98 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 599 | 107.99 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 609 | 108.01 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 612 | 108.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 628 | 108.06 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 633 | 108.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 673 | 108.13 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 683 | 108.15 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 686 | 108.15 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 12 |
| 708 | 108.20 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 722 | 108.23 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 738 | 108.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 789 | 108.35 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 791 | 108.35 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 802 | 108.38 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 804 | 108.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 819 | 108.41 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 858 | 108.49 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 875 | 108.50 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 885 | 108.53 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 887 | 108.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 888 | 108.53 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 889 | 108.53 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 897 | 108.53 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 899 | 108.54 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 902 | 108.54 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 904 | 108.54 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 906 | 108.54 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 923 | 108.56 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 928 | 108.57 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 957 | 108.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 997 | 108.65 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |