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Os09g0524800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.8 (0.0531) R2 : 0.371
β1 : -2.08 (0.196) R2dD : 0.169 R2D : 0.106
β2 : 1.33 (0.138) R2dC : 0.14 R2C : 0.0614
β3 : 1.87 (0.169) R2dE : 0.195 R2E : 0.0581
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.159 (0.115) R2dN8 : 0.00337 R2N8 : 0.00405
σ : 0.99
deviance : 451.95
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C
peak time of C : 15.6
E
wheather : temperature
threshold : 29.04
memory length : 828
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.9
open length of G : 1.03

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
439.54 0.985 6.59 9.16 1.42 -10.2 -0.47 113 -0.157 15.7 30.18 740 17.9 0.625
560.34 1.11 7.82 -1.78 0.836 1.44 -1.98 -- -0.359 14.5 30.18 740 17.9 0.625
439.42 0.976 6.58 9.19 1.43 -10.1 -- 112 -0.146 15.8 30.2 733 17.9 0.349
451.95 0.99 7.8 -2.08 1.33 1.87 -- -- -0.159 15.6 29.04 828 17.9 1.03
537.05 1.08 6.49 10.2 -- -10.1 -- 109 -0.25 -- 31.57 870 17.1 0.717
566.89 1.12 7.82 -1.77 0.882 -- -1.87 -- -0.373 14.7 -- -- -- --
576.2 1.12 7.83 -1.82 0.928 -- -- -- -0.381 15.6 -- -- -- --
534.92 1.08 7.77 -2.07 -- 1.46 -- -- -0.252 -- 30 772 17.8 0.0247
566.22 1.11 7.77 -- 1.36 1.72 -- -- -0.0177 15.5 29.39 807 17.9 2.09
624.03 1.17 7.83 -1.85 -- -- -- -- -0.406 -- -- -- -- --
663.1 1.2 7.79 -- 0.963 -- -- -- -0.179 15.6 -- -- -- --
649.19 1.19 7.75 -- -- 1.23 -- -- -0.0271 -- 30.69 926 17.8 0.0197
714.76 1.25 7.79 -- -- -- -- -- -0.2 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 441.53 temperature 30 720 > th dose dependent rect. 18 1
15 446.68 temperature 10 720 > th dose dependent rect. 17 6
17 448.01 humidity 70 720 < th dose independent rect. 18 13
18 448.05 humidity 70 720 < th dose independent rect. 18 2
29 448.51 humidity 70 720 < th dose dependent rect. 18 2
41 448.84 temperature 30 720 < th dose independent rect. 18 1
50 450.25 humidity 70 720 > th dose independent rect. 18 2
62 450.39 humidity 50 1440 < th dose independent rect. 16 1
63 450.51 temperature 25 720 > th dose dependent rect. 21 1
64 450.78 humidity 50 1440 < th dose dependent rect. 16 1
79 451.20 temperature 30 720 > th dose independent rect. 18 1
99 452.59 humidity 70 720 > th dose independent rect. 17 9
105 453.29 humidity 70 720 > th dose independent rect. 17 16
137 454.94 humidity 70 1440 < th dose dependent rect. 16 3
168 455.53 humidity 70 1440 < th dose dependent rect. 16 15
195 457.89 humidity 70 720 < th dose independent sin 12 NA
216 459.02 humidity 50 1440 > th dose independent rect. 16 1
221 459.59 temperature 30 720 < th dose dependent rect. 18 5
228 460.01 temperature 30 720 < th dose independent rect. 17 9
257 461.21 temperature 30 720 < th dose independent rect. 17 16
332 463.12 humidity 70 1440 < th dose dependent sin 12 NA
342 463.66 humidity 70 720 > th dose independent sin 12 NA
347 463.84 humidity 60 1440 > th dose independent rect. 16 13
375 464.55 radiation 1 720 > th dose independent rect. 18 1
391 464.76 wind 1 90 < th dose independent rect. 4 1
404 464.84 temperature 25 720 < th dose independent rect. 19 5
556 465.92 radiation 1 720 > th dose dependent rect. 18 1
610 466.53 wind 1 90 < th dose dependent rect. 4 1
796 468.56 temperature 25 720 > th dose dependent sin 13 NA
933 471.25 radiation 20 1440 > th dose dependent rect. 16 16
963 472.14 radiation 20 1440 > th dose independent rect. 16 16