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Os09g0522000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CBF-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.53 (0.0649) R2 : 0.404
β1 : -- (--) R2dD : -- R2D : --
β2 : 8.46 (0.533) R2dC : 3.47 R2C : -1.88
β3 : 7.92 (0.615) R2dE : 2.3 R2E : -3.11
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.428 (0.136) R2dN8 : 0.0172 R2N8 : -0.0157
σ : 1.19
deviance : 649.17
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C
peak time of C : 17
E
wheather : humidity
threshold : 72.5
memory length : 710
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.9
open length of G : 10.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
650.06 1.2 8.55 -0.418 8.22 7.51 4.76 4.82 -0.49 16.9 71 708 17 10.1
643.19 1.18 8.54 -0.445 8.43 7.87 0.709 -- -0.476 17 72.28 710 16.9 10.4
650.87 1.19 8.45 -0.311 7.44 6.92 -- 0.784 -0.391 16.9 73 712 16.4 10.6
643.88 1.18 8.54 -0.441 8.44 7.89 -- -- -0.472 17 72.6 710 16.9 10.4
984.26 1.47 8.35 -0.679 -- 0.853 -- 1.73 -0.217 -- 73 712 16.4 10.6
817.96 1.34 8.38 -0.576 2.17 -- 1.98 -- -0.129 18.8 -- -- -- --
827.8 1.35 8.38 -0.607 2.18 -- -- -- -0.123 18.7 -- -- -- --
919.8 1.41 8.32 -0.471 -- 1.32 -- -- -0.168 -- 48 1457 16.8 11.1
649.17 1.19 8.53 -- 8.46 7.92 -- -- -0.428 17 72.5 710 16.9 10.4
1076.69 1.53 8.33 -0.658 -- -- -- -- -0.166 -- -- -- -- --
837.52 1.35 8.36 -- 2.19 -- -- -- -0.0551 18.7 -- -- -- --
883.86 1.38 8.32 -- -- 2.29 -- -- -0.303 -- 48.51 1454 16.7 10.6
1088.11 1.54 8.32 -- -- -- -- -- -0.0933 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 657.10 humidity 70 720 > th dose independent rect. 17 10
5 662.43 humidity 70 720 > th dose independent rect. 17 2
8 664.16 humidity 70 720 > th dose independent rect. 16 4
12 671.68 temperature 30 720 < th dose independent rect. 17 2
17 676.57 humidity 70 720 > th dose independent rect. 16 7
18 676.74 humidity 70 720 > th dose independent rect. 16 17
21 678.60 humidity 70 720 < th dose independent rect. 16 15
22 678.77 humidity 70 720 < th dose independent rect. 16 4
34 678.94 humidity 70 720 < th dose independent sin 13 NA
49 680.13 temperature 30 720 < th dose independent rect. 17 10
57 682.36 humidity 50 720 > th dose dependent rect. 17 2
64 683.63 humidity 80 720 < th dose dependent rect. 17 8
71 684.37 humidity 70 720 > th dose independent sin 13 NA
83 685.59 humidity 80 720 < th dose dependent rect. 19 1
91 687.44 humidity 50 720 > th dose dependent rect. 16 10
119 690.50 humidity 80 720 < th dose dependent sin 13 NA
138 691.97 humidity 50 720 > th dose dependent rect. 16 7
245 699.22 temperature 30 720 < th dose independent rect. 16 17
267 701.22 radiation 10 720 < th dose dependent rect. 16 10
299 702.38 temperature 30 720 < th dose independent rect. 16 7
306 702.67 temperature 25 720 > th dose dependent rect. 17 5
324 703.98 temperature 25 720 > th dose dependent rect. 19 2
345 705.39 radiation 10 720 < th dose dependent rect. 16 2
364 706.73 radiation 10 720 < th dose independent rect. 16 10
387 707.87 humidity 50 720 > th dose dependent sin 15 NA
446 710.13 temperature 25 720 > th dose dependent rect. 16 14
457 710.46 temperature 30 720 > th dose independent rect. 17 2
476 710.62 radiation 10 720 < th dose independent rect. 16 1
627 714.71 temperature 25 720 > th dose dependent sin 14 NA
748 718.55 temperature 30 720 < th dose independent sin 13 NA
887 722.14 radiation 1 720 < th dose independent rect. 8 11
927 723.56 temperature 30 720 > th dose independent sin 13 NA
981 724.52 radiation 1 720 > th dose independent rect. 10 20
999 724.81 radiation 10 1440 > th dose independent rect. 8 23