Os09g0518900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0518900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217.7 | 0.693 | 7.76 | -1.25 | 0.51 | -0.612 | -0.73 | -1.45 | -0.0114 | 23.3 | 20 | 266 | -- | -- |
| 224.55 | 0.698 | 7.76 | -1.36 | 0.532 | -0.377 | -0.659 | -- | 0.00782 | 23.1 | 20.42 | 249 | -- | -- |
| 219.49 | 0.69 | 7.75 | -1.22 | 0.527 | -0.583 | -- | -1.48 | -0.0113 | 23.5 | 20.1 | 221 | -- | -- |
| 226.8 | 0.701 | 7.79 | -1.4 | 0.527 | -0.393 | -- | -- | -0.0556 | 23.4 | 20.5 | 225 | -- | -- |
| 235.81 | 0.715 | 7.74 | -1.15 | -- | -0.533 | -- | -1.53 | -0.00726 | -- | 20.16 | 366 | -- | -- |
| 229.27 | 0.71 | 7.77 | -1.32 | 0.483 | -- | -0.815 | -- | 0.02 | 23 | -- | -- | -- | -- |
| 232.08 | 0.713 | 7.77 | -1.28 | 0.487 | -- | -- | -- | 0.0229 | 23 | -- | -- | -- | -- |
| 236.08 | 0.716 | 7.79 | -1.34 | -- | -0.5 | -- | -- | -0.153 | -- | 24.8 | 820 | -- | -- |
| 274.41 | 0.776 | 7.74 | -- | 0.51 | -0.145 | -- | -- | 0.139 | 23 | 20.82 | 10 | -- | -- |
| 246.82 | 0.734 | 7.76 | -1.27 | -- | -- | -- | -- | 0.0264 | -- | -- | -- | -- | -- |
| 275.42 | 0.776 | 7.74 | -- | 0.477 | -- | -- | -- | 0.166 | 22.8 | -- | -- | -- | -- |
| 279.9 | 0.782 | 7.72 | -- | -- | 0.354 | -- | -- | 0.177 | -- | 28.47 | 4 | -- | -- |
| 289.48 | 0.794 | 7.73 | -- | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.80 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 5 | 213.84 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 8 | 214.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 25 | 214.88 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 27 | 214.96 | wind | 3.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 28 | 214.99 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 9 | 21 |
| 29 | 215.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 18 |
| 35 | 215.13 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 42 | 215.21 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 19 |
| 57 | 215.31 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 22 |
| 62 | 215.33 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 15 | 22 |
| 65 | 215.35 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 81 | 215.39 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 83 | 215.40 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 84 | 215.41 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 85 | 215.41 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 102 | 215.50 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 117 | 215.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 158 | 215.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 164 | 215.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 166 | 215.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 12 | 15 |
| 189 | 215.87 | wind | 1.0 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 199 | 215.91 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 223 | 216.00 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 227 | 216.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 229 | 216.03 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 230 | 216.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 243 | 216.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 248 | 216.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 255 | 216.14 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 267 | 216.17 | wind | 1.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 268 | 216.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 15 |
| 319 | 216.37 | wind | 1.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 338 | 216.43 | wind | 1.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 356 | 216.49 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 360 | 216.51 | temperature | 20.0 | 720 | < th | dose independent | sin | 21 | NA |
| 363 | 216.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 365 | 216.53 | wind | 1.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 385 | 216.58 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 398 | 216.62 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 411 | 216.68 | wind | 3.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 426 | 216.74 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 437 | 216.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 443 | 216.79 | temperature | 20.0 | 720 | > th | dose independent | sin | 19 | NA |
| 461 | 216.85 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 8 |
| 462 | 216.85 | temperature | 20.0 | 720 | < th | dose independent | rect. | 10 | 11 |
| 465 | 216.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 498 | 216.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 508 | 216.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 509 | 216.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 518 | 217.01 | wind | 1.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 539 | 217.05 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 543 | 217.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 550 | 217.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 561 | 217.09 | wind | 1.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 567 | 217.10 | atmosphere | 1005.0 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 570 | 217.11 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 581 | 217.12 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 605 | 217.16 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 625 | 217.19 | wind | 1.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 631 | 217.20 | wind | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 647 | 217.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 657 | 217.23 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 689 | 217.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 709 | 217.31 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 23 |
| 736 | 217.35 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 741 | 217.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 754 | 217.37 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 853 | 217.52 | wind | 3.0 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 868 | 217.54 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 872 | 217.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 18 |
| 879 | 217.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 885 | 217.55 | temperature | 20.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 897 | 217.56 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 906 | 217.57 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 914 | 217.58 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 934 | 217.60 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 953 | 217.60 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |