Os09g0516600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glyoxalase II.
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Os09g0516600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glyoxalase II.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.8 | 0.321 | 12.5 | -1.46 | 2.16 | -0.699 | 0.58 | 0.309 | -0.431 | 7.3 | 61.63 | 1196 | -- | -- |
| 46.89 | 0.319 | 12.4 | -1.44 | 2.17 | -0.698 | 0.633 | -- | -0.43 | 7.33 | 62.84 | 1168 | -- | -- |
| 47.69 | 0.322 | 12.5 | -1.46 | 2.15 | -0.706 | -- | 0.404 | -0.437 | 7.3 | 62.03 | 1194 | -- | -- |
| 47.82 | 0.322 | 12.5 | -1.41 | 2.15 | -0.743 | -- | -- | -0.456 | 7.3 | 66.17 | 1201 | -- | -- |
| 283.44 | 0.784 | 12.5 | -1.41 | -- | -0.912 | -- | 0.44 | -0.434 | -- | 68 | 1350 | -- | -- |
| 55.6 | 0.35 | 12.4 | -1.41 | 2.14 | -- | 0.576 | -- | -0.372 | 7.03 | -- | -- | -- | -- |
| 56.47 | 0.352 | 12.4 | -1.4 | 2.14 | -- | -- | -- | -0.373 | 7.03 | -- | -- | -- | -- |
| 186.69 | 0.636 | 12.5 | -1.54 | -- | 1.99 | -- | -- | -0.369 | -- | 58.26 | 506 | -- | -- |
| 96.52 | 0.458 | 12.5 | -- | 2.34 | -1.16 | -- | -- | -0.487 | 7.71 | 81.03 | 1022 | -- | -- |
| 297.93 | 0.807 | 12.5 | -1.36 | -- | -- | -- | -- | -0.334 | -- | -- | -- | -- | -- |
| 108.16 | 0.486 | 12.4 | -- | 2.13 | -- | -- | -- | -0.217 | 7.08 | -- | -- | -- | -- |
| 233.29 | 0.711 | 12.4 | -- | -- | 1.94 | -- | -- | -0.106 | -- | 60.76 | 523 | -- | -- |
| 346.56 | 0.869 | 12.5 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.74 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 2 | 42.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 3 | 42.86 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 8 | 43.22 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 10 | 43.28 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 11 | 43.28 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 15 | 43.33 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 17 | 43.35 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 21 | 43.40 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 27 | 43.48 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 70 | 43.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 72 | 43.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 96 | 44.20 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 99 | 44.21 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 104 | 44.24 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 106 | 44.25 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 107 | 44.25 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 110 | 44.27 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 112 | 44.27 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 119 | 44.31 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 143 | 44.45 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 144 | 44.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 173 | 44.55 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 176 | 44.56 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 187 | 44.59 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 232 | 44.82 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 293 | 45.08 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 298 | 45.09 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 379 | 45.34 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 443 | 45.57 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 448 | 45.65 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 490 | 45.88 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 12 |
| 518 | 45.96 | humidity | 90.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 573 | 46.17 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 615 | 46.28 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 640 | 46.32 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 682 | 46.40 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 721 | 46.48 | radiation | 1.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 727 | 46.49 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 750 | 46.54 | radiation | 1.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 782 | 46.59 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 813 | 46.61 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 836 | 46.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 916 | 46.71 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 958 | 46.76 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 13 |
| 965 | 46.77 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 972 | 46.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 18 |