Os09g0514100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
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Os09g0514100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.22 | 0.333 | 5.84 | -0.113 | 0.427 | 1.48 | -0.349 | 0.429 | 0.253 | 22.7 | 9.91 | 12 | -- | -- |
| 50.34 | 0.33 | 5.84 | -0.177 | 0.427 | 1.5 | -0.442 | -- | 0.235 | 22.8 | 9.28 | 12 | -- | -- |
| 50.58 | 0.331 | 5.83 | -0.0431 | 0.43 | 1.45 | -- | 0.782 | 0.272 | 22.4 | 8.065 | 9 | -- | -- |
| 51.08 | 0.333 | 5.84 | -0.152 | 0.427 | 1.46 | -- | -- | 0.242 | 22.4 | 7.932 | 12 | -- | -- |
| 57.49 | 0.353 | 5.82 | -0.136 | -- | 1.24 | -- | -0.0141 | 0.269 | -- | 0.665 | 341 | -- | -- |
| 70 | 0.392 | 5.79 | 0.142 | 0.402 | -- | 0.887 | -- | 0.447 | 17.6 | -- | -- | -- | -- |
| 71.42 | 0.396 | 5.79 | 0.135 | 0.419 | -- | -- | -- | 0.45 | 18.5 | -- | -- | -- | -- |
| 57.49 | 0.353 | 5.82 | -0.133 | -- | 1.24 | -- | -- | 0.27 | -- | 7.851 | 344 | -- | -- |
| 51.63 | 0.335 | 5.84 | -- | 0.416 | 1.39 | -- | -- | 0.268 | 22.2 | 9.493 | 12 | -- | -- |
| 80.54 | 0.419 | 5.79 | 0.125 | -- | -- | -- | -- | 0.441 | -- | -- | -- | -- | -- |
| 71.9 | 0.397 | 5.8 | -- | 0.417 | -- | -- | -- | 0.435 | 18.5 | -- | -- | -- | -- |
| 57.92 | 0.354 | 5.82 | -- | -- | 1.2 | -- | -- | 0.29 | -- | -2.941 | 335 | -- | -- |
| 80.94 | 0.42 | 5.79 | -- | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 7 | 47.00 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 8 | 47.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 13 | 47.15 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 14 | 47.25 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 27 | 47.43 | temperature | 30 | 30 | < th | dose dependent | sin | 4 | NA |
| 50 | 48.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 72 | 48.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 75 | 48.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 180 | 49.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 237 | 50.22 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 261 | 50.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 278 | 50.38 | temperature | 25 | 720 | < th | dose dependent | sin | 4 | NA |
| 282 | 50.38 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 289 | 50.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 298 | 50.43 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 301 | 50.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 302 | 50.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 308 | 50.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 370 | 50.68 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 433 | 50.96 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 461 | 51.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 484 | 51.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 498 | 51.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 506 | 51.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 507 | 51.22 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 545 | 51.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 585 | 51.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 601 | 51.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 611 | 51.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 619 | 51.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 734 | 51.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 796 | 51.97 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 809 | 52.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 826 | 52.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 978 | 52.42 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |