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Os09g0511500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, RING-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0176) R2 : 0.0437
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.17 (0.0371) R2dN8 : 0.0565 R2N8 : 0.0437
σ : 0.332
deviance : 50.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.54 0.237 11.1 -0.553 0.363 -0.22 0.111 0.43 -0.207 5.09 87 243 -- --
26.25 0.239 11.1 -0.573 0.361 -0.231 -0.174 -- -0.206 4.73 86 365 -- --
25.55 0.235 11.1 -0.554 0.362 -0.221 -- 0.388 -0.208 5.14 86.89 234 -- --
26.17 0.238 11.1 -0.575 0.363 -0.223 -- -- -0.207 5.22 85.98 241 -- --
29 0.251 11.1 -0.566 -- -0.415 -- 0.401 -0.222 -- 83.25 320 -- --
28.53 0.25 11.1 -0.541 0.533 -- -0.124 -- -0.242 5.06 -- -- -- --
28.57 0.25 11.1 -0.541 0.532 -- -- -- -0.241 5.06 -- -- -- --
29.32 0.252 11.1 -0.584 -- -0.447 -- -- -0.214 -- 83.22 359 -- --
34.74 0.274 11 -- 0.383 -0.176 -- -- -0.153 5.34 85.27 218 -- --
43.44 0.308 11.1 -0.522 -- -- -- -- -0.227 -- -- -- -- --
36.28 0.282 11 -- 0.523 -- -- -- -0.181 5.09 -- -- -- --
38.17 0.288 11.1 -- -- -0.424 -- -- -0.157 -- 79.48 372 -- --
50.62 0.332 11.1 -- -- -- -- -- -0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.96 temperature 10.0 1440 > th dose independent rect. 5 5
4 23.96 atmosphere 995.0 1440 > th dose independent rect. 5 5
5 23.96 atmosphere 1015.0 1440 < th dose independent rect. 5 5
6 23.96 temperature 10.0 1440 > th dose independent rect. 10 19
9 24.04 wind 1.0 30 > th dose independent rect. 4 5
10 24.25 temperature 15.0 30 > th dose independent rect. 9 19
11 24.28 humidity 90.0 90 < th dose independent rect. 9 18
13 24.40 humidity 50.0 4320 > th dose independent rect. 5 5
23 24.52 temperature 15.0 270 > th dose independent rect. 7 20
30 24.61 radiation 40.0 90 < th dose independent rect. 4 16
34 24.68 temperature 10.0 30 > th dose dependent rect. 9 19
35 24.69 radiation 40.0 10 < th dose independent rect. 5 15
40 24.77 temperature 10.0 1440 > th dose independent rect. 21 8
43 24.77 temperature 30.0 1440 < th dose independent rect. 21 8
47 24.77 humidity 50.0 1440 > th dose independent rect. 21 8
53 24.77 atmosphere 995.0 1440 > th dose independent rect. 21 8
54 24.77 radiation 20.0 1440 < th dose independent rect. 21 8
66 24.77 temperature 10.0 1440 > th dose independent rect. 5 16
72 24.78 humidity 90.0 270 < th dose dependent rect. 20 17
74 24.80 temperature 10.0 30 > th dose dependent rect. 4 5
80 24.85 wind 1.0 270 > th dose independent rect. 4 1
86 24.88 temperature 15.0 270 > th dose independent rect. 19 8
88 24.88 temperature 15.0 30 > th dose dependent rect. 20 8
89 24.89 atmosphere 1000.0 270 > th dose independent rect. 5 23
90 24.90 radiation 30.0 90 < th dose independent rect. 4 5
96 24.93 atmosphere 995.0 30 > th dose independent rect. 9 19
99 24.96 radiation 20.0 270 < th dose independent rect. 2 7
106 24.97 atmosphere 1000.0 270 > th dose independent rect. 18 9
111 24.98 precipitation 0.1 30 < th dose independent rect. 9 19
113 24.98 precipitation 0.1 30 < th dose dependent rect. 9 19
114 24.99 wind 9.0 30 < th dose independent rect. 4 5
115 24.99 temperature 10.0 30 > th dose independent rect. 4 5
117 24.99 temperature 30.0 30 < th dose independent rect. 4 5
118 24.99 humidity 50.0 30 > th dose independent rect. 4 5
120 24.99 atmosphere 995.0 30 > th dose independent rect. 4 5
121 24.99 atmosphere 1015.0 30 < th dose independent rect. 4 5
123 24.99 radiation 1.0 270 < th dose independent rect. 3 15
127 24.99 radiation 40.0 90 < th dose dependent rect. 4 16
129 25.00 precipitation 0.1 30 < th dose independent rect. 4 5
131 25.00 temperature 15.0 270 > th dose independent rect. 20 16
136 25.00 precipitation 0.1 30 < th dose dependent rect. 4 5
137 25.00 temperature 10.0 270 > th dose dependent rect. 20 6
138 25.00 humidity 90.0 10 < th dose dependent rect. 9 6
140 25.01 humidity 80.0 10 < th dose independent rect. 9 6
148 25.03 radiation 30.0 90 < th dose independent rect. 4 7
160 25.05 precipitation 0.1 270 < th dose independent rect. 5 23
161 25.05 atmosphere 1010.0 270 < th dose dependent rect. 13 7
162 25.05 radiation 40.0 270 < th dose dependent rect. 2 7
163 25.05 precipitation 0.1 270 < th dose dependent rect. 5 23
170 25.09 radiation 1.0 270 < th dose independent rect. 4 2
171 25.09 humidity 80.0 10 < th dose independent rect. 9 8
172 25.09 radiation 1.0 270 < th dose dependent rect. 4 1
179 25.11 temperature 25.0 30 > th dose independent rect. 1 8
186 25.12 atmosphere 995.0 30 > th dose dependent rect. 4 5
188 25.12 atmosphere 1010.0 90 < th dose dependent rect. 15 7
190 25.12 radiation 40.0 270 < th dose dependent rect. 2 9
191 25.12 radiation 40.0 10 < th dose dependent rect. 5 15
197 25.13 radiation 1.0 270 < th dose dependent rect. 4 14
206 25.15 wind 9.0 30 < th dose independent rect. 9 19
209 25.15 humidity 80.0 270 > th dose dependent rect. 3 19
218 25.17 wind 7.0 270 < th dose independent rect. 4 1
219 25.17 humidity 80.0 270 > th dose independent rect. 4 1
236 25.18 temperature 10.0 270 > th dose independent rect. 4 1
238 25.18 temperature 30.0 270 < th dose independent rect. 4 1
239 25.18 humidity 50.0 270 > th dose independent rect. 4 1
242 25.18 atmosphere 995.0 270 > th dose independent rect. 4 1
243 25.18 atmosphere 1010.0 270 < th dose independent rect. 4 1
255 25.18 atmosphere 1000.0 10 > th dose independent rect. 20 9
271 25.19 temperature 10.0 270 > th dose dependent rect. 4 1
307 25.22 precipitation 0.1 270 < th dose independent rect. 4 1
310 25.22 wind 1.0 30 > th dose independent rect. 9 19
312 25.22 precipitation 0.1 270 < th dose dependent rect. 4 1
315 25.23 temperature 25.0 30 > th dose independent rect. 3 6
318 25.23 radiation 1.0 270 < th dose independent rect. 4 10
344 25.25 radiation 1.0 30 > th dose independent rect. 9 8
348 25.25 atmosphere 1010.0 10 < th dose dependent rect. 14 8
351 25.26 humidity 80.0 270 > th dose independent rect. 2 17
356 25.26 radiation 40.0 1440 < th dose dependent rect. 21 8
368 25.27 temperature 10.0 270 > th dose dependent rect. 2 6
385 25.28 humidity 80.0 270 > th dose independent rect. 2 12
395 25.29 wind 1.0 30 > th dose independent rect. 4 16
413 25.30 atmosphere 1015.0 30 < th dose dependent rect. 17 16
422 25.31 wind 9.0 30 < th dose independent rect. 17 16
425 25.31 humidity 50.0 270 > th dose dependent rect. 4 1
430 25.31 radiation 40.0 270 < th dose dependent rect. 2 11
447 25.33 atmosphere 995.0 30 > th dose independent rect. 9 8
450 25.33 humidity 50.0 30 > th dose independent rect. 17 16
452 25.33 humidity 50.0 30 > th dose independent rect. 9 19
455 25.33 temperature 15.0 30 > th dose dependent rect. 22 6
457 25.33 humidity 50.0 90 > th dose dependent rect. 4 16
472 25.35 humidity 90.0 270 < th dose dependent rect. 9 1
492 25.37 temperature 10.0 30 > th dose independent rect. 9 8
494 25.37 atmosphere 1015.0 30 < th dose independent rect. 9 8
495 25.37 precipitation 0.1 30 < th dose independent rect. 9 8
498 25.37 temperature 10.0 30 > th dose independent rect. 17 16
503 25.37 radiation 1.0 10 > th dose dependent rect. 9 8
504 25.37 precipitation 0.1 30 < th dose dependent rect. 9 8
525 25.38 wind 1.0 30 > th dose independent rect. 9 8
538 25.39 humidity 90.0 10 < th dose independent rect. 4 5
541 25.39 humidity 50.0 14400 > th dose independent rect. 19 10
544 25.39 radiation 40.0 30 < th dose independent rect. 17 16
554 25.39 humidity 70.0 270 > th dose dependent rect. 3 11
557 25.39 atmosphere 995.0 30 > th dose dependent rect. 9 19
563 25.40 humidity 90.0 30 < th dose independent rect. 11 15
565 25.40 humidity 90.0 270 < th dose dependent sin 7 NA
566 25.40 atmosphere 995.0 270 > th dose dependent rect. 4 1
568 25.40 wind 9.0 90 < th dose dependent rect. 4 5
581 25.41 atmosphere 1015.0 30 < th dose independent rect. 9 19
631 25.43 humidity 90.0 90 < th dose independent rect. 20 7
657 25.44 wind 9.0 30 < th dose independent rect. 9 8
662 25.44 humidity 60.0 30 > th dose independent rect. 4 16
687 25.45 precipitation 0.1 30 < th dose independent rect. 17 16
688 25.45 humidity 80.0 270 < th dose independent rect. 21 17
699 25.45 radiation 1.0 270 < th dose dependent rect. 4 10
704 25.45 precipitation 0.1 30 < th dose dependent rect. 17 16
722 25.46 humidity 70.0 270 > th dose dependent rect. 3 14
741 25.47 precipitation 0.1 270 < th dose independent rect. 7 20
742 25.47 humidity 50.0 270 > th dose independent rect. 6 21
747 25.47 humidity 60.0 90 > th dose dependent rect. 4 9
752 25.47 humidity 50.0 10 > th dose dependent rect. 5 15
755 25.47 precipitation 0.1 270 < th dose dependent rect. 7 20
765 25.48 atmosphere 1010.0 30 < th dose independent rect. 20 8
766 25.48 radiation 1.0 270 > th dose independent rect. 7 8
825 25.50 temperature 10.0 1440 > th dose independent rect. 23 6
828 25.50 temperature 30.0 1440 < th dose independent rect. 23 6
832 25.50 humidity 50.0 1440 > th dose independent rect. 23 6
841 25.50 atmosphere 995.0 1440 > th dose independent rect. 23 6
842 25.50 radiation 20.0 1440 < th dose independent rect. 23 6
856 25.50 temperature 10.0 1440 > th dose independent rect. 10 8
864 25.50 temperature 10.0 1440 > th dose independent rect. 18 16
869 25.50 temperature 10.0 1440 > th dose independent rect. 5 18
888 25.51 humidity 90.0 270 < th dose independent rect. 9 1
904 25.51 wind 9.0 1440 < th dose independent rect. 5 4
946 25.51 humidity 50.0 270 > th dose dependent rect. 3 4
992 25.53 humidity 70.0 270 > th dose independent rect. 18 9
994 25.53 atmosphere 995.0 30 > th dose independent rect. 17 16