Os09g0507800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 60S ribosomal protein L7a.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0507800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : 60S ribosomal protein L7a.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.54 | 0.483 | 14.5 | 0.535 | 1.06 | 0.379 | 1.03 | -1.84 | -0.0144 | 17.9 | 20.1 | 4145 | -- | -- |
| 107.96 | 0.484 | 14.4 | 0.872 | 1.07 | 0.76 | 1.07 | -- | 0.0764 | 17.9 | 19.8 | 2648 | -- | -- |
| 108.03 | 0.484 | 14.5 | 0.496 | 1.06 | 0.381 | -- | -1.96 | -0.0253 | 17.9 | 20.29 | 4153 | -- | -- |
| 110.7 | 0.49 | 14.4 | 0.839 | 1.07 | 0.796 | -- | -- | 0.0714 | 17.8 | 19.72 | 2690 | -- | -- |
| 166.38 | 0.601 | 14.5 | 0.533 | -- | 0.388 | -- | -1.75 | -0.0224 | -- | 20.2 | 3678 | -- | -- |
| 119.44 | 0.512 | 14.4 | 1.27 | 1.04 | -- | 1.18 | -- | 0.252 | 18 | -- | -- | -- | -- |
| 122.84 | 0.519 | 14.4 | 1.26 | 1.05 | -- | -- | -- | 0.257 | 17.9 | -- | -- | -- | -- |
| 162.8 | 0.594 | 14.4 | 0.961 | -- | 0.739 | -- | -- | 0.0721 | -- | 20.4 | 417 | -- | -- |
| 115.96 | 0.502 | 14.5 | -- | 1.05 | 1.27 | -- | -- | -0.117 | 17.9 | 18.6 | 14235 | -- | -- |
| 179.52 | 0.626 | 14.4 | 1.23 | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
| 164.44 | 0.6 | 14.4 | -- | 1.03 | -- | -- | -- | 0.117 | 18 | -- | -- | -- | -- |
| 172.22 | 0.611 | 14.4 | -- | -- | 1.17 | -- | -- | -0.112 | -- | 15.9 | 47520 | -- | -- |
| 219.1 | 0.691 | 14.4 | -- | -- | -- | -- | -- | 0.0972 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.82 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 2 | 96.96 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 4 | 97.68 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 7 | 98.01 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 9 | 98.04 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 20 | 98.55 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 33 | 99.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 61 | 99.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 96 | 100.47 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 112 | 100.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 152 | 101.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 168 | 101.61 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 193 | 101.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 212 | 102.02 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 241 | 102.23 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 264 | 102.46 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 296 | 102.70 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 324 | 102.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 333 | 103.05 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 334 | 103.07 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 363 | 103.24 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 368 | 103.27 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 395 | 103.42 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 400 | 103.45 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 412 | 103.55 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 458 | 103.74 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 468 | 103.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 470 | 103.82 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 493 | 103.97 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 498 | 103.98 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 501 | 104.00 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 516 | 104.10 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 568 | 104.27 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 584 | 104.32 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 597 | 104.35 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 598 | 104.35 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 615 | 104.40 | temperature | 20.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 617 | 104.40 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 620 | 104.40 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 632 | 104.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 639 | 104.46 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 653 | 104.48 | temperature | 20.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 672 | 104.53 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 691 | 104.56 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 693 | 104.56 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 713 | 104.61 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 716 | 104.61 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 718 | 104.61 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 734 | 104.64 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 738 | 104.64 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 766 | 104.70 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 778 | 104.72 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 792 | 104.75 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 799 | 104.77 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 808 | 104.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 811 | 104.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 819 | 104.81 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 832 | 104.83 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 868 | 104.89 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 879 | 104.91 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 883 | 104.92 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 901 | 104.95 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 905 | 104.96 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 911 | 104.96 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 928 | 105.02 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 931 | 105.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 935 | 105.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 938 | 105.03 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 17 |
| 942 | 105.03 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 953 | 105.06 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 962 | 105.08 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 963 | 105.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 965 | 105.08 | temperature | 25.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 966 | 105.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 967 | 105.09 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 976 | 105.09 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 980 | 105.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 982 | 105.10 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 6 |