FiT-DB / Search/ Help/ Sample detail

Os09g0505600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.00992) R2 : 0.024
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.07 (0.0209) R2dN8 : 0.031 R2N8 : 0.024
σ : 0.187
deviance : 16.04
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.63 0.16 12.5 0.223 0.0385 -0.106 -0.265 -0.598 -0.0531 0.672 21.4 3371 -- --
11.97 0.162 12.4 0.365 0.011 -0.0823 -0.282 -- -0.0133 0.43 21.4 3371 -- --
11.88 0.161 12.5 0.218 0.0405 -0.11 -- -0.649 -0.0578 0.296 21.31 3619 -- --
12.15 0.162 12.4 0.388 0.0273 -0.0867 -- -- 0.00595 22.5 23.2 250 -- --
11.99 0.161 12.5 0.218 -- -0.103 -- -0.643 -0.0569 -- 21.4 3595 -- --
12.29 0.164 12.4 0.344 0.037 -- -0.271 -- -0.0325 0.496 -- -- -- --
12.61 0.166 12.4 0.354 0.0378 -- -- -- -0.0312 0.425 -- -- -- --
12.08 0.162 12.4 0.394 -- -0.107 -- -- 0.0151 -- 22.3 77 -- --
15.6 0.185 12.4 -- 0.0963 0.0714 -- -- -0.0889 1.86 26.49 105 -- --
12.7 0.167 12.4 0.356 -- -- -- -- -0.0306 -- -- -- -- --
15.92 0.187 12.4 -- 0.0432 -- -- -- -0.0706 0.844 -- -- -- --
15.87 0.186 12.4 -- -- -0.0496 -- -- -0.0574 -- 22.11 74 -- --
16.04 0.187 12.4 -- -- -- -- -- -0.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.74 temperature 10.0 90 > th dose dependent rect. 21 8
7 10.86 atmosphere 1015.0 90 < th dose independent rect. 21 8
12 10.94 humidity 80.0 90 > th dose dependent rect. 5 6
14 10.98 radiation 40.0 90 < th dose dependent rect. 5 6
16 11.01 wind 9.0 90 < th dose independent rect. 5 16
17 11.01 precipitation 0.1 90 < th dose independent rect. 5 16
18 11.01 humidity 70.0 90 > th dose dependent rect. 5 4
21 11.01 precipitation 0.1 90 < th dose dependent rect. 5 16
22 11.02 radiation 20.0 90 < th dose independent rect. 5 6
24 11.02 radiation 30.0 90 < th dose dependent rect. 5 4
27 11.02 humidity 50.0 90 > th dose dependent rect. 21 8
28 11.03 wind 9.0 90 < th dose independent rect. 21 8
29 11.03 temperature 10.0 90 > th dose independent rect. 21 8
30 11.03 temperature 30.0 90 < th dose independent rect. 21 8
31 11.03 humidity 50.0 90 > th dose independent rect. 21 8
34 11.03 atmosphere 995.0 90 > th dose independent rect. 21 8
35 11.03 radiation 20.0 90 < th dose independent rect. 21 8
38 11.03 temperature 10.0 90 > th dose independent rect. 5 16
39 11.03 atmosphere 1015.0 90 < th dose independent rect. 5 16
40 11.03 atmosphere 1015.0 90 < th dose independent rect. 8 21
44 11.04 radiation 20.0 90 < th dose independent rect. 5 4
46 11.04 radiation 1.0 90 < th dose independent rect. 21 8
48 11.04 precipitation 0.1 90 < th dose independent rect. 21 8
52 11.04 radiation 1.0 90 < th dose dependent rect. 21 8
57 11.04 precipitation 0.1 90 < th dose dependent rect. 21 8
58 11.04 radiation 1.0 90 < th dose dependent rect. 21 22
65 11.07 wind 1.0 90 > th dose independent rect. 5 3
68 11.07 atmosphere 1000.0 90 > th dose independent rect. 5 16
69 11.07 humidity 70.0 10 > th dose dependent rect. 6 3
73 11.07 radiation 1.0 10 < th dose dependent rect. 22 21
75 11.08 temperature 20.0 90 > th dose independent rect. 22 7
78 11.08 wind 9.0 90 < th dose dependent rect. 21 8
98 11.12 atmosphere 1015.0 90 < th dose dependent rect. 5 4
100 11.12 humidity 80.0 90 > th dose dependent rect. 5 10
102 11.13 radiation 10.0 270 < th dose dependent rect. 5 1
110 11.14 wind 1.0 90 > th dose independent rect. 5 16
111 11.14 radiation 1.0 30 < th dose independent rect. 21 22
117 11.15 wind 1.0 10 > th dose independent rect. 5 17
130 11.16 temperature 15.0 90 > th dose independent rect. 8 11
136 11.17 atmosphere 1010.0 90 < th dose independent rect. 5 3
138 11.17 temperature 10.0 1440 > th dose independent rect. 23 7
141 11.17 temperature 30.0 1440 < th dose independent rect. 23 7
145 11.17 humidity 50.0 1440 > th dose independent rect. 23 7
154 11.17 atmosphere 995.0 1440 > th dose independent rect. 23 7
155 11.17 radiation 20.0 1440 < th dose independent rect. 23 7
165 11.17 temperature 10.0 1440 > th dose independent rect. 6 17
175 11.18 wind 7.0 90 < th dose independent rect. 5 3
177 11.18 temperature 10.0 90 > th dose independent rect. 5 3
179 11.18 temperature 30.0 90 < th dose independent rect. 5 3
180 11.18 humidity 50.0 90 > th dose independent rect. 5 3
184 11.18 atmosphere 995.0 90 > th dose independent rect. 5 3
191 11.18 temperature 10.0 90 > th dose independent rect. 8 21
203 11.19 precipitation 0.1 90 < th dose independent rect. 5 3
207 11.19 precipitation 0.1 90 < th dose dependent rect. 5 3
222 11.20 atmosphere 995.0 90 > th dose independent rect. 8 21
223 11.20 precipitation 0.1 90 < th dose independent rect. 8 21
231 11.20 precipitation 0.1 90 < th dose dependent rect. 8 21
232 11.21 humidity 80.0 10 > th dose independent rect. 6 3
266 11.23 humidity 90.0 270 < th dose independent rect. 24 16
274 11.23 wind 9.0 90 < th dose dependent rect. 5 3
276 11.23 radiation 30.0 10 < th dose dependent rect. 6 3
284 11.23 radiation 1.0 90 < th dose dependent rect. 21 17
304 11.24 humidity 90.0 10 < th dose independent rect. 9 10
305 11.24 radiation 20.0 90 < th dose independent rect. 19 14
310 11.24 radiation 1.0 10 < th dose dependent sin 7 NA
328 11.24 radiation 1.0 10 < th dose dependent rect. 22 16
333 11.25 humidity 50.0 90 > th dose independent rect. 5 16
335 11.25 wind 9.0 90 < th dose independent rect. 8 21
340 11.25 temperature 10.0 90 > th dose dependent rect. 5 3
349 11.25 wind 9.0 90 < th dose dependent rect. 13 16
361 11.26 temperature 10.0 1440 > th dose independent rect. 6 4
366 11.26 atmosphere 995.0 1440 > th dose independent rect. 6 4
368 11.26 atmosphere 1015.0 1440 < th dose independent rect. 6 4
380 11.26 radiation 1.0 10 < th dose independent rect. 22 16
384 11.26 temperature 10.0 1440 > th dose independent rect. 10 20
423 11.27 atmosphere 1015.0 30 < th dose independent rect. 13 16
447 11.28 radiation 30.0 10 < th dose independent rect. 5 7
449 11.28 humidity 90.0 270 < th dose independent rect. 7 9
453 11.28 humidity 50.0 90 > th dose independent rect. 8 21
456 11.28 radiation 1.0 90 < th dose dependent sin 9 NA
462 11.28 atmosphere 1015.0 10 < th dose dependent rect. 6 3
463 11.28 temperature 20.0 30 > th dose dependent rect. 1 4
473 11.28 radiation 1.0 10 < th dose dependent rect. 22 14
475 11.29 radiation 1.0 10 < th dose independent sin 7 NA
476 11.29 wind 9.0 1440 < th dose independent rect. 6 3
482 11.29 humidity 50.0 1440 > th dose independent rect. 6 3
493 11.29 radiation 1.0 10 < th dose independent rect. 22 14
504 11.29 atmosphere 1015.0 270 < th dose dependent rect. 5 1
506 11.29 temperature 20.0 270 > th dose dependent rect. 24 2
529 11.30 humidity 80.0 90 > th dose independent rect. 5 6
563 11.30 radiation 40.0 90 < th dose independent rect. 5 16
574 11.30 temperature 30.0 10 < th dose dependent rect. 6 3
592 11.31 wind 1.0 270 > th dose independent rect. 5 1
597 11.31 radiation 20.0 10 < th dose independent rect. 6 3
600 11.31 temperature 20.0 10 > th dose independent rect. 5 4
605 11.31 wind 3.0 90 < th dose independent rect. 5 7
648 11.31 atmosphere 995.0 90 > th dose dependent rect. 5 16
655 11.32 temperature 30.0 90 < th dose independent rect. 5 6
679 11.32 temperature 30.0 90 < th dose dependent rect. 5 3
697 11.33 radiation 1.0 10 > th dose independent sin 7 NA
704 11.33 atmosphere 1000.0 30 > th dose independent rect. 5 8
706 11.33 wind 5.0 90 < th dose independent rect. 13 16
709 11.33 atmosphere 1015.0 270 < th dose independent rect. 9 18
710 11.33 precipitation 0.1 270 < th dose independent rect. 6 23
735 11.33 precipitation 0.1 270 < th dose dependent rect. 6 23
745 11.34 wind 9.0 1440 < th dose independent rect. 23 7
795 11.35 atmosphere 1010.0 90 < th dose independent rect. 6 1
812 11.35 atmosphere 1000.0 30 > th dose independent rect. 19 14
828 11.35 wind 9.0 90 < th dose dependent rect. 17 12
831 11.35 wind 9.0 90 < th dose dependent rect. 9 20
836 11.36 temperature 20.0 270 > th dose independent rect. 5 1
842 11.36 radiation 1.0 270 < th dose independent rect. 4 7
844 11.36 wind 1.0 10 > th dose independent rect. 5 8
845 11.36 wind 9.0 30 < th dose independent rect. 5 8
869 11.36 temperature 30.0 90 < th dose dependent rect. 5 6
892 11.37 wind 7.0 10 < th dose independent rect. 6 2
894 11.37 temperature 10.0 10 > th dose independent rect. 6 2
896 11.37 temperature 30.0 10 < th dose independent rect. 6 2
897 11.37 humidity 50.0 10 > th dose independent rect. 6 2
899 11.37 atmosphere 995.0 10 > th dose independent rect. 6 2
900 11.37 atmosphere 1015.0 10 < th dose independent rect. 6 2
902 11.37 precipitation 0.1 10 < th dose independent rect. 6 2
942 11.37 atmosphere 1015.0 90 < th dose independent rect. 11 18
947 11.37 temperature 10.0 270 > th dose dependent rect. 5 1
952 11.37 precipitation 0.1 10 < th dose dependent rect. 6 2
974 11.37 humidity 90.0 270 > th dose dependent rect. 4 15
997 11.38 temperature 10.0 1440 > th dose independent rect. 6 8