BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0505600 Os09g0505600|AK103136
(221 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60820.1 | chr3:22472038-22473809 REVERSE LENGTH=224 359 e-100
AT1G21720.1 | chr1:7626394-7628070 FORWARD LENGTH=205 82 2e-16
AT1G77440.1 | chr1:29096334-29098105 FORWARD LENGTH=205 82 3e-16
AT3G26340.1 | chr3:9650600-9652572 REVERSE LENGTH=274 56 2e-08
>AT3G60820.1 | chr3:22472038-22473809 REVERSE LENGTH=224
Length = 223
Score = 359 bits (922), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 192/220 (87%), Gaps = 1/220 (0%)
Query: 3 RRGDWV-YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGF 61
+ +W Y+NNGGTCVAIAG+DYCV+AADTR+S GY+IL+RD+SKI +LAD+ L+SSGF
Sbjct: 4 QHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGF 63
Query: 62 QGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEG 121
Q D+KAL K L +R L+YQHQHNK+MSCPAMAQLLSNTLY+KRFFPYYAFNVLGGLD EG
Sbjct: 64 QADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEG 123
Query: 122 KGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVD 181
KGCVFTYDAVGSYER GY AQG+GS LIMP LDNQLKSPSPLLLP +D+ TPLSE EAVD
Sbjct: 124 KGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVD 183
Query: 182 LVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
LVK VFASATERDIYTGDKLEI+++ G K E +DLRKD
Sbjct: 184 LVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>AT1G21720.1 | chr1:7626394-7628070 FORWARD LENGTH=205
Length = 204
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKA 67
++E NG VA+ G + +A+D RL V + D +I ++ D+ + SG D++
Sbjct: 3 IFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQT 62
Query: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
L++ L R LYQ + + M A L+S LY KRF PY V+ GL + K + T
Sbjct: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICT 122
Query: 128 YDAVGSYERTG-YSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDV 186
D++G+ E + GT S + + K P +A E + +
Sbjct: 123 MDSIGAKELAKDFVVSGTASESLYGACEAMYK-------PDMEA------EELFETISQA 169
Query: 187 FASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
S+ +RD +G + ++ K + R D
Sbjct: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
>AT1G77440.1 | chr1:29096334-29098105 FORWARD LENGTH=205
Length = 204
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 14/215 (6%)
Query: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKA 67
++E NG VA+ G + +A+D RL V + D +I ++ D + SG D++
Sbjct: 3 IFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQT 62
Query: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
L++ L R LYQ + + M A L+S LY KRF P+ V+ GL + K + T
Sbjct: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICT 122
Query: 128 YDAVGSYERTG-YSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDV 186
D++G+ E + GT S + + K P +A E + +
Sbjct: 123 MDSIGAKELAKDFVVSGTASESLYGACEAMFK-------PDMEA------EELFETISQA 169
Query: 187 FASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
S+ +RD +G + V+ K + R D
Sbjct: 170 LLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD 204
>AT3G26340.1 | chr3:9650600-9652572 REVERSE LENGTH=274
Length = 273
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
G T +A + +VAAD+R S+G I ++ KI E+ +G D + H+N
Sbjct: 56 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 115
Query: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
L + L++ + +R+S ++LL+N LY R ++ G D G G + +
Sbjct: 116 LGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEG 175
Query: 132 GSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASAT 191
G + +S G+GS VLD+ K +S EA +L + AT
Sbjct: 176 GRLKGDRFSV-GSGSPYAYGVLDSGYK-------------FDMSVEEASELARRSIYHAT 221
Query: 192 ERDIYTGDKLEIVVINKAGTKR 213
RD +G + + G +
Sbjct: 222 FRDGASGGVASVYHVGPQGWTK 243
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,764,949
Number of extensions: 189433
Number of successful extensions: 433
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 435
Number of HSP's successfully gapped: 4
Length of query: 221
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 126
Effective length of database: 8,502,049
Effective search space: 1071258174
Effective search space used: 1071258174
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)