Os09g0494600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF599 family protein.
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Os09g0494600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF599 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 450.65 | 0.997 | 9.81 | -3.1 | 3.87 | 5.49 | 1.72 | 18.8 | 0.212 | 10.4 | 2.301 | 11800 | -- | -- |
| 649.85 | 1.19 | 9.47 | 0.0806 | 3.9 | 2.99 | -0.0159 | -- | 1.05 | 9.21 | 23.68 | 14333 | -- | -- |
| 443.38 | 0.981 | 9.8 | -2.63 | 3.78 | 5.47 | -- | 18.1 | 0.367 | 10.2 | 2.185 | 16112 | -- | -- |
| 620.09 | 1.16 | 9.41 | -0.201 | 3.37 | 3.01 | -- | -- | 1.04 | 9.65 | 23.25 | 14277 | -- | -- |
| 831.02 | 1.34 | 9.71 | -2.41 | -- | 6.57 | -- | 16.8 | 0.705 | -- | 3.109 | 11114 | -- | -- |
| 985.16 | 1.47 | 9.56 | -0.0914 | 3.56 | -- | 0.00495 | -- | 0.147 | 9.78 | -- | -- | -- | -- |
| 985.16 | 1.47 | 9.56 | -0.0912 | 3.56 | -- | -- | -- | 0.147 | 9.78 | -- | -- | -- | -- |
| 999.35 | 1.47 | 9.31 | -0.00922 | -- | 5.92 | -- | -- | 1.71 | -- | 5.921 | 8201 | -- | -- |
| 609.11 | 1.15 | 9.34 | -- | 3.3 | 3.05 | -- | -- | 1.12 | 9.53 | 13.87 | 14229 | -- | -- |
| 1742.45 | 1.95 | 9.66 | -0.126 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 985.38 | 1.47 | 9.56 | -- | 3.56 | -- | -- | -- | 0.157 | 9.78 | -- | -- | -- | -- |
| 996.13 | 1.47 | 9.31 | -- | -- | 5.95 | -- | -- | 1.72 | -- | 5.904 | 8233 | -- | -- |
| 1742.87 | 1.95 | 9.65 | -- | -- | -- | -- | -- | 0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 425.44 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 2 | 425.45 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 3 | 425.68 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 9 | 426.93 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 10 | 427.09 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 11 | 427.17 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 16 | 427.49 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 37 | 428.73 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 62 | 429.74 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 82 | 430.92 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 91 | 431.16 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 130 | 432.57 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 144 | 433.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 147 | 433.01 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 159 | 433.08 | temperature | 25.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 168 | 433.48 | temperature | 25.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 189 | 434.10 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 10 |
| 204 | 434.48 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 243 | 435.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 244 | 435.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 251 | 435.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 314 | 436.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 319 | 436.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 321 | 436.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 14 |
| 434 | 437.96 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 21 | NA |
| 457 | 438.34 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 521 | 439.21 | temperature | 30.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 702 | 441.11 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 710 | 441.19 | temperature | 30.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 714 | 441.22 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 767 | 441.66 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 804 | 442.00 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 0 | NA |
| 806 | 442.00 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 0 | NA |
| 814 | 442.05 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 820 | 442.10 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 826 | 442.16 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 0 | NA |
| 839 | 442.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 897 | 442.68 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 915 | 442.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 971 | 443.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 972 | 443.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |