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Os09g0487500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0112) R2 : 0.0388
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.101 (0.0235) R2dN8 : 0.0502 R2N8 : 0.0388
σ : 0.21
deviance : 20.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.33 0.165 13.9 -0.517 0.202 0.619 0.0518 -1.17 -0.0631 12.9 10.27 797 -- --
13.33 0.17 13.9 -0.308 0.198 0.618 0.212 -- -0.00671 12.6 9.625 783 -- --
12.34 0.164 13.9 -0.52 0.202 0.62 -- -1.19 -0.0643 12.8 10.25 797 -- --
13.53 0.171 13.9 -0.301 0.199 0.611 -- -- -0.00725 12.6 9.72 777 -- --
13.24 0.169 13.9 -0.411 -- 0.656 -- -0.901 -0.037 -- 9.238 225 -- --
18.22 0.2 13.9 -0.144 0.158 -- 0.189 -- 0.0878 15.3 -- -- -- --
18.32 0.2 13.9 -0.14 0.161 -- -- -- 0.089 15.5 -- -- -- --
13.78 0.173 13.9 -0.273 -- 0.641 -- -- 0.00159 -- 9.474 170 -- --
15.57 0.184 13.9 -- 0.167 0.485 -- -- 0.0436 12.7 8.656 674 -- --
19.77 0.208 13.9 -0.147 -- -- -- -- 0.0847 -- -- -- -- --
18.84 0.203 13.9 -- 0.163 -- -- -- 0.105 15.5 -- -- -- --
15.62 0.184 13.9 -- -- 0.55 -- -- 0.0411 -- 7.855 164 -- --
20.34 0.21 13.9 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.35 wind 1 43200 > th dose dependent rect. 4 12
3 11.38 humidity 90 14400 < th dose independent rect. 21 1
4 11.38 wind 3 43200 > th dose dependent rect. 6 1
5 11.38 wind 9 43200 < th dose dependent rect. 4 12
18 11.42 wind 3 43200 > th dose independent rect. 3 12
23 11.43 humidity 80 43200 > th dose independent rect. 23 2
24 11.43 wind 1 43200 > th dose dependent sin 3 NA
29 11.44 humidity 80 43200 < th dose independent rect. 23 1
34 11.45 wind 9 43200 < th dose dependent sin 2 NA
45 11.47 humidity 80 43200 < th dose independent rect. 3 4
46 11.47 wind 3 43200 > th dose independent rect. 4 10
51 11.48 humidity 80 43200 > th dose independent rect. 22 9
59 11.49 humidity 80 43200 > th dose independent rect. 3 2
65 11.49 wind 1 43200 > th dose dependent rect. 20 20
66 11.49 wind 9 43200 < th dose dependent rect. 20 20
69 11.50 humidity 90 14400 > th dose dependent rect. 18 8
73 11.51 humidity 80 43200 < th dose independent rect. 3 2
76 11.51 humidity 80 43200 > th dose independent rect. 3 4
77 11.51 humidity 90 14400 < th dose independent rect. 17 9
78 11.51 humidity 80 43200 < th dose independent rect. 22 9
92 11.52 humidity 80 43200 > th dose independent rect. 23 6
101 11.53 humidity 90 14400 < th dose independent rect. 18 7
114 11.54 wind 3 43200 < th dose independent rect. 3 11
132 11.55 humidity 80 43200 < th dose dependent rect. 22 1
142 11.56 wind 3 43200 > th dose independent sin 4 NA
154 11.56 wind 3 43200 > th dose dependent rect. 3 18
168 11.57 humidity 80 14400 > th dose dependent rect. 18 1
224 11.60 radiation 1 14400 < th dose independent rect. 18 11
246 11.61 humidity 90 14400 > th dose independent rect. 18 9
249 11.61 wind 9 43200 > th dose dependent rect. 19 2
263 11.61 wind 9 43200 < th dose dependent rect. 3 19
335 11.64 wind 3 43200 > th dose dependent rect. 14 23
362 11.65 wind 9 43200 < th dose dependent rect. 15 22
367 11.66 wind 3 43200 < th dose independent sin 4 NA
378 11.66 radiation 1 14400 > th dose independent rect. 18 11
408 11.67 wind 3 43200 > th dose dependent no NA NA
422 11.67 wind 3 43200 > th dose dependent rect. 9 23
423 11.67 wind 3 43200 > th dose dependent rect. 11 23
432 11.68 wind 1 43200 > th dose dependent rect. 20 1
493 11.70 radiation 1 14400 > th dose independent rect. 18 1
513 11.70 humidity 90 14400 > th dose dependent rect. 21 3
539 11.71 radiation 1 14400 < th dose independent rect. 18 1
549 11.71 wind 3 43200 > th dose independent rect. 20 18
583 11.72 wind 9 43200 < th dose dependent rect. 20 1
650 11.74 wind 9 43200 < th dose dependent no NA NA
688 11.76 humidity 80 14400 > th dose independent rect. 17 1
699 11.76 humidity 90 14400 > th dose dependent sin 15 NA
732 11.77 wind 1 43200 > th dose dependent rect. 9 1
782 11.79 humidity 90 14400 < th dose independent sin 16 NA
812 11.79 wind 9 43200 < th dose dependent rect. 8 23
813 11.79 wind 9 43200 < th dose dependent rect. 11 23
841 11.80 wind 9 43200 < th dose dependent rect. 5 23
843 11.81 wind 9 43200 < th dose independent rect. 19 2
851 11.81 wind 3 43200 < th dose independent rect. 20 18
888 11.82 wind 9 43200 < th dose dependent rect. 6 1
903 11.83 humidity 90 14400 > th dose independent sin 15 NA
905 11.83 wind 3 43200 > th dose independent rect. 9 4
918 11.83 wind 9 43200 < th dose dependent rect. 9 1
936 11.84 wind 9 43200 > th dose independent rect. 19 2
950 11.84 wind 5 43200 < th dose dependent rect. 9 1
975 11.85 humidity 90 14400 < th dose independent rect. 18 1
983 11.85 wind 3 43200 > th dose independent rect. 20 14