Os09g0481600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0481600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.27 | 0.68 | 7.08 | -1.24 | 2.97 | -1.46 | 3.14 | 1.48 | -0.567 | 4.6 | 15.55 | 1401 | -- | -- |
| 213.27 | 0.68 | 7.08 | -1.04 | 2.95 | -1.44 | 3.09 | -- | -0.511 | 4.63 | 13.75 | 1399 | -- | -- |
| 235.12 | 0.714 | 7.08 | -1.23 | 3.01 | -1.5 | -- | 1.42 | -0.581 | 4.57 | 14.03 | 1412 | -- | -- |
| 237.99 | 0.719 | 7.08 | -1.05 | 2.98 | -1.47 | -- | -- | -0.528 | 4.62 | 13.79 | 1406 | -- | -- |
| 702.51 | 1.23 | 7.13 | -1.22 | -- | -1.75 | -- | 1.15 | -0.569 | -- | 26.56 | 1371 | -- | -- |
| 276.65 | 0.78 | 6.99 | -0.866 | 3.03 | -- | 3.29 | -- | -0.16 | 4.42 | -- | -- | -- | -- |
| 306.02 | 0.819 | 7 | -0.892 | 3.06 | -- | -- | -- | -0.178 | 4.44 | -- | -- | -- | -- |
| 703.81 | 1.24 | 7.11 | -1.03 | -- | -1.72 | -- | -- | -0.52 | -- | 21.54 | 1380 | -- | -- |
| 260.41 | 0.752 | 7.06 | -- | 2.96 | -1.59 | -- | -- | -0.413 | 4.63 | 10 | 1415 | -- | -- |
| 806.41 | 1.33 | 7.02 | -0.772 | -- | -- | -- | -- | -0.0968 | -- | -- | -- | -- | -- |
| 327 | 0.846 | 6.97 | -- | 3.04 | -- | -- | -- | -0.0782 | 4.45 | -- | -- | -- | -- |
| 722.22 | 1.25 | 7.08 | -- | -- | -1.89 | -- | -- | -0.354 | -- | 10 | 1389 | -- | -- |
| 822.15 | 1.34 | 7 | -- | -- | -- | -- | -- | -0.0111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 209.20 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 4 | 209.95 | radiation | 10 | 1440 | > th | dose independent | sin | 5 | NA |
| 6 | 210.02 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 35 | 210.61 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 36 | 210.79 | radiation | 20 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 37 | 210.79 | radiation | 20 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 39 | 210.82 | radiation | 20 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 41 | 210.83 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 43 | 210.84 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 50 | 210.92 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 55 | 211.11 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 81 | 211.36 | radiation | 10 | 1440 | < th | dose dependent | sin | 0 | NA |
| 101 | 211.58 | radiation | 20 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 118 | 211.65 | radiation | 20 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 119 | 211.66 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 123 | 211.66 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 258 | 212.46 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 413 | 213.06 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 422 | 213.11 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 580 | 213.86 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 610 | 213.98 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 670 | 214.30 | radiation | 1 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 712 | 214.40 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 854 | 214.83 | radiation | 1 | 1440 | > th | dose dependent | no | NA | NA |
| 936 | 214.95 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 953 | 215.02 | radiation | 1 | 1440 | > th | dose dependent | sin | 2 | NA |