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Os09g0456700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.02 (0.0317) R2 : 0.744
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.21 (0.0846) R2dC : 0.407 R2C : 0.175
β3 : -2.08 (0.0684) R2dE : 0.558 R2E : 0.322
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.218 (0.0667) R2dN8 : 0.00942 R2N8 : 0.0107
σ : 0.595
deviance : 163.12
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_____
C
peak time of C : 4.65
E
wheather : radiation
threshold : 0.96
memory length : 31
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 7.14
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
158.12 0.591 9.01 -0.251 2.21 -2.08 1.06 -0.495 0.222 4.67 0.96 31 7.12 --
159.14 0.588 9.02 -0.249 2.17 -2.03 0.938 -- 0.214 4.77 0.9509 32 7.21 --
160.81 0.591 9.02 -0.26 2.19 -2.07 -- -0.28 0.218 4.68 0.9597 32 7.22 --
161.2 0.591 9.02 -0.264 2.21 -2.08 -- -- 0.216 4.65 0.96 31 7.17 --
202.96 0.664 9.04 -0.192 -- -2.78 -- -0.842 0.266 -- 70.54 5 9.97 --
202.96 0.668 8.96 -0.216 2.78 -- 0.839 -- 0.266 8.08 -- -- -- --
205.07 0.671 8.96 -0.192 2.78 -- -- -- 0.266 8.08 -- -- -- --
205.07 0.667 9.04 -0.192 -- -2.78 -- -- 0.266 -- 72.08 2 9.94 --
163.12 0.595 9.02 -- 2.21 -2.08 -- -- 0.218 4.65 0.96 31 7.14 --
627.99 1.17 9.03 -0.167 -- -- -- -- 0.3 -- -- -- -- --
206.04 0.671 8.96 -- 2.78 -- -- -- 0.287 8.09 -- -- -- --
206.04 0.669 9.03 -- -- -2.78 -- -- 0.287 -- 106.7 2 9.93 --
628.73 1.17 9.03 -- -- -- -- -- 0.318 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 153.45 radiation 1.0 90 < th dose dependent rect. 5 22
2 153.58 radiation 1.0 90 < th dose independent rect. 6 21
7 156.10 radiation 1.0 90 < th dose independent rect. 11 16
12 156.30 radiation 1.0 90 < th dose independent rect. 13 14
14 156.40 radiation 40.0 270 < th dose dependent rect. 15 11
16 156.81 radiation 1.0 90 < th dose dependent rect. 11 16
20 157.01 radiation 1.0 90 < th dose dependent rect. 13 14
27 157.86 radiation 20.0 270 < th dose independent rect. 15 11
29 158.16 radiation 1.0 30 > th dose independent rect. 14 17
30 158.55 radiation 1.0 30 < th dose independent sin 13 NA
31 158.68 radiation 1.0 30 > th dose independent rect. 12 19
35 159.09 radiation 1.0 30 > th dose independent sin 13 NA
48 160.66 radiation 1.0 30 < th dose dependent sin 13 NA
54 161.12 precipitation 0.1 270 < th dose independent rect. 10 21
55 161.12 precipitation 0.1 270 < th dose dependent rect. 10 21
60 161.38 humidity 50.0 270 > th dose independent rect. 16 10
62 161.42 precipitation 0.1 270 < th dose independent rect. 2 14
63 161.42 precipitation 0.1 270 < th dose dependent rect. 2 14
71 161.86 precipitation 0.1 270 < th dose independent rect. 11 19
72 161.86 precipitation 0.1 270 < th dose dependent rect. 11 19
74 161.88 humidity 50.0 90 > th dose dependent rect. 17 10
78 162.14 humidity 50.0 90 > th dose dependent rect. 7 20
79 162.17 temperature 20.0 270 > th dose independent rect. 6 19
98 163.04 temperature 30.0 90 < th dose independent rect. 17 10
115 163.64 temperature 10.0 270 > th dose dependent rect. 7 3
130 164.05 precipitation 0.1 90 < th dose independent rect. 13 18
131 164.05 precipitation 0.1 90 < th dose dependent rect. 13 18
137 164.10 temperature 10.0 270 > th dose dependent rect. 6 5
169 164.81 precipitation 0.1 270 < th dose independent rect. 3 2
170 164.81 temperature 20.0 270 > th dose independent rect. 6 5
171 164.81 precipitation 0.1 270 < th dose dependent rect. 3 2
181 164.94 humidity 70.0 270 > th dose independent rect. 6 20
201 165.29 wind 5.0 270 < th dose independent rect. 3 2
232 165.72 humidity 50.0 10 > th dose dependent rect. 9 18
234 165.77 temperature 20.0 270 > th dose independent rect. 7 3
235 165.81 wind 5.0 90 < th dose independent rect. 3 4
242 165.90 humidity 60.0 270 > th dose independent rect. 7 3
259 166.15 humidity 50.0 270 > th dose independent rect. 6 5
260 166.15 wind 9.0 90 < th dose dependent rect. 7 20
262 166.17 humidity 50.0 90 > th dose independent rect. 7 20
278 166.43 precipitation 0.1 90 < th dose independent rect. 3 4
279 166.43 humidity 70.0 90 > th dose independent rect. 15 12
282 166.43 precipitation 0.1 90 < th dose dependent rect. 3 4
284 166.48 wind 7.0 270 < th dose independent rect. 6 5
293 166.62 wind 5.0 270 < th dose independent rect. 1 5
294 166.67 wind 7.0 90 < th dose dependent rect. 3 4
308 166.96 temperature 10.0 270 > th dose independent rect. 16 10
310 166.96 temperature 10.0 270 > th dose independent rect. 2 14
311 166.96 atmosphere 1015.0 270 < th dose independent rect. 2 14
321 167.05 precipitation 0.1 10 < th dose independent rect. 14 17
322 167.05 precipitation 0.1 10 < th dose dependent rect. 14 17
325 167.07 atmosphere 995.0 270 > th dose independent rect. 6 5
326 167.07 atmosphere 1015.0 270 < th dose independent rect. 6 5
327 167.07 temperature 10.0 270 > th dose independent rect. 11 19
332 167.15 precipitation 0.1 270 < th dose independent rect. 6 5
333 167.15 precipitation 0.1 270 < th dose dependent rect. 6 5
335 167.16 wind 9.0 270 < th dose independent rect. 11 19
342 167.18 wind 7.0 270 < th dose independent rect. 7 3
368 167.39 wind 1.0 270 > th dose independent rect. 7 3
370 167.40 atmosphere 995.0 270 > th dose independent rect. 7 3
371 167.40 atmosphere 1015.0 270 < th dose independent rect. 7 3
372 167.40 temperature 10.0 270 > th dose independent rect. 10 21
373 167.42 temperature 25.0 270 < th dose independent rect. 23 7
381 167.49 precipitation 0.1 270 < th dose independent rect. 7 3
382 167.49 precipitation 0.1 270 < th dose dependent rect. 7 3
395 167.60 temperature 25.0 90 > th dose dependent rect. 13 9
396 167.61 temperature 25.0 270 < th dose independent rect. 2 3
397 167.62 wind 9.0 270 < th dose dependent rect. 3 2
405 167.70 atmosphere 995.0 270 > th dose independent rect. 16 10
408 167.71 wind 9.0 270 < th dose independent rect. 10 21
429 167.99 precipitation 0.1 270 < th dose independent rect. 1 5
431 167.99 precipitation 0.1 270 < th dose dependent rect. 1 5
433 168.01 wind 9.0 270 < th dose independent rect. 16 10
442 168.10 wind 9.0 90 < th dose independent rect. 7 20
444 168.12 radiation 1.0 270 > th dose independent rect. 11 8
472 168.26 wind 9.0 270 < th dose independent rect. 2 14
473 168.27 temperature 25.0 90 > th dose dependent rect. 13 7
474 168.27 temperature 25.0 10 > th dose dependent rect. 14 17
492 168.40 temperature 10.0 90 > th dose independent rect. 3 4
495 168.40 humidity 50.0 90 > th dose independent rect. 3 4
497 168.40 atmosphere 995.0 90 > th dose independent rect. 3 4
498 168.40 atmosphere 1015.0 90 < th dose independent rect. 3 4
499 168.40 radiation 40.0 90 < th dose independent rect. 3 4
504 168.40 temperature 10.0 90 > th dose independent rect. 13 18
514 168.45 wind 9.0 270 < th dose dependent rect. 7 3
530 168.54 wind 9.0 90 < th dose dependent rect. 7 6
542 168.61 wind 1.0 270 > th dose independent rect. 6 5
553 168.65 atmosphere 1015.0 90 < th dose dependent rect. 7 6
554 168.67 temperature 25.0 90 > th dose dependent rect. 13 18
571 168.91 wind 1.0 270 > th dose independent rect. 11 19
601 169.14 wind 5.0 43200 < th dose dependent rect. 24 4
606 169.20 wind 3.0 30 < th dose independent rect. 3 6
612 169.25 wind 7.0 10 < th dose dependent rect. 3 6
616 169.28 temperature 10.0 270 > th dose independent rect. 3 2
619 169.28 humidity 50.0 270 > th dose independent rect. 3 2
622 169.28 atmosphere 995.0 270 > th dose independent rect. 3 2
623 169.28 atmosphere 1010.0 270 < th dose independent rect. 3 2
625 169.28 radiation 1.0 270 < th dose independent rect. 3 2
633 169.28 radiation 1.0 270 < th dose dependent rect. 3 2
642 169.32 temperature 30.0 270 < th dose independent rect. 6 19
649 169.38 humidity 80.0 720 < th dose dependent rect. 18 14
652 169.42 atmosphere 1015.0 270 < th dose dependent rect. 7 3
666 169.53 temperature 25.0 10 > th dose dependent rect. 14 9
668 169.54 atmosphere 995.0 270 > th dose independent rect. 2 14
673 169.56 temperature 10.0 270 > th dose dependent rect. 21 14
680 169.61 wind 3.0 43200 < th dose independent rect. 22 12
684 169.62 humidity 90.0 10 < th dose dependent rect. 14 17
692 169.68 atmosphere 995.0 90 > th dose independent rect. 7 20
704 169.75 wind 3.0 43200 > th dose independent rect. 22 12
708 169.76 wind 9.0 270 < th dose independent rect. 5 22
714 169.81 wind 1.0 270 > th dose independent rect. 3 1
720 169.85 radiation 1.0 270 > th dose independent rect. 7 3
725 169.86 temperature 10.0 270 > th dose dependent rect. 11 10
729 169.87 temperature 15.0 270 > th dose dependent rect. 11 7
730 169.88 atmosphere 1015.0 90 < th dose independent rect. 7 20
743 169.93 temperature 10.0 270 > th dose dependent rect. 19 16
752 169.96 temperature 25.0 10 > th dose dependent rect. 14 6
755 169.98 wind 3.0 43200 < th dose independent rect. 22 7
780 170.07 wind 1.0 43200 > th dose dependent rect. 23 14
784 170.08 wind 5.0 43200 < th dose dependent rect. 23 6
815 170.20 humidity 90.0 90 < th dose dependent rect. 13 18
829 170.25 wind 5.0 90 < th dose independent rect. 7 20
901 170.39 temperature 20.0 10 > th dose independent rect. 7 7
903 170.39 wind 7.0 43200 < th dose dependent rect. 23 14
923 170.47 precipitation 0.1 10 < th dose independent rect. 3 6
924 170.47 wind 3.0 43200 > th dose independent rect. 3 9
926 170.47 temperature 20.0 270 > th dose independent rect. 18 17
927 170.47 precipitation 0.1 10 < th dose dependent rect. 3 6
980 170.64 wind 3.0 43200 < th dose independent rect. 3 9