Os09g0453500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Spectrin repeat containing protein.
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Os09g0453500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Spectrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.13 | 0.385 | 11.1 | 1.18 | 1.25 | -0.8 | 0.931 | 0.00402 | 0.29 | 22.3 | 75.65 | 1150 | -- | -- |
| 67.13 | 0.382 | 11.1 | 1.18 | 1.25 | -0.799 | 0.931 | -- | 0.291 | 22.3 | 75.78 | 1152 | -- | -- |
| 70.29 | 0.39 | 11.1 | 1.18 | 1.26 | -0.822 | -- | 0.525 | 0.297 | 22.2 | 76.37 | 1139 | -- | -- |
| 70.58 | 0.391 | 11.1 | 1.15 | 1.24 | -0.769 | -- | -- | 0.294 | 22.2 | 75.98 | 1154 | -- | -- |
| 143.33 | 0.561 | 11.1 | 1.03 | -- | -0.676 | -- | -0.585 | 0.31 | -- | 85 | 1524 | -- | -- |
| 80.8 | 0.421 | 11.1 | 1.03 | 1.11 | -- | 0.783 | -- | 0.339 | 22 | -- | -- | -- | -- |
| 83.18 | 0.427 | 11.1 | 1 | 1.11 | -- | -- | -- | 0.338 | 22 | -- | -- | -- | -- |
| 143.95 | 0.561 | 11.1 | 1.03 | -- | -0.691 | -- | -- | 0.309 | -- | 85.01 | 1522 | -- | -- |
| 102.55 | 0.472 | 11.1 | -- | 1.27 | -0.679 | -- | -- | 0.242 | 22.3 | 118.6 | 1101 | -- | -- |
| 156.71 | 0.585 | 11.1 | 1.02 | -- | -- | -- | -- | 0.338 | -- | -- | -- | -- | -- |
| 109.76 | 0.49 | 11.1 | -- | 1.11 | -- | -- | -- | 0.226 | 22 | -- | -- | -- | -- |
| 170.21 | 0.61 | 11.1 | -- | -- | -0.722 | -- | -- | 0.231 | -- | 136.5 | 1529 | -- | -- |
| 184.01 | 0.633 | 11.1 | -- | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.27 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 2 | 63.45 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 11 |
| 7 | 64.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 11 | 65.10 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 12 | 65.35 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 23 | 66.18 | radiation | 10.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 31 | 66.58 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 41 | 66.92 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 44 | 67.03 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 55 | 67.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 57 | 67.33 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 58 | 67.38 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 60 | 67.44 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 64 | 67.49 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 15 |
| 68 | 67.53 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 71 | 67.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 72 | 67.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 82 | 67.70 | wind | 7.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 83 | 67.70 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 87 | 67.74 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 92 | 67.82 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 122 | 67.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 129 | 67.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 131 | 67.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 134 | 68.01 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 155 | 68.12 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 156 | 68.14 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 167 | 68.20 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 178 | 68.25 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 200 | 68.39 | humidity | 70.0 | 720 | > th | dose independent | sin | 13 | NA |
| 202 | 68.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 218 | 68.51 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 221 | 68.53 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 229 | 68.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 230 | 68.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 232 | 68.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 233 | 68.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 247 | 68.70 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 257 | 68.77 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 259 | 68.77 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 260 | 68.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 262 | 68.77 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 263 | 68.77 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 264 | 68.77 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 274 | 68.82 | wind | 5.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 276 | 68.85 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 290 | 68.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 302 | 68.96 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 305 | 68.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 316 | 68.97 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 323 | 69.00 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 335 | 69.06 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 336 | 69.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 342 | 69.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 346 | 69.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 347 | 69.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 353 | 69.13 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 358 | 69.16 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 367 | 69.20 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 372 | 69.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 374 | 69.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 375 | 69.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 377 | 69.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 378 | 69.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 379 | 69.21 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 385 | 69.22 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 387 | 69.23 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 392 | 69.24 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 17 |
| 417 | 69.33 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 432 | 69.33 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 447 | 69.39 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 457 | 69.42 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 458 | 69.42 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 19 |
| 461 | 69.43 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 463 | 69.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 465 | 69.44 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 471 | 69.45 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 481 | 69.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 20 |
| 485 | 69.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 518 | 69.57 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 643 | 69.73 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 646 | 69.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 649 | 69.75 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 4 |
| 673 | 69.77 | humidity | 50.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 678 | 69.77 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 683 | 69.78 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 691 | 69.79 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 720 | 69.83 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 765 | 69.90 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 776 | 69.91 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 778 | 69.92 | humidity | 80.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 783 | 69.93 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 801 | 69.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 806 | 69.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 870 | 69.99 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 889 | 70.02 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 890 | 70.02 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 909 | 70.04 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 21 |
| 940 | 70.07 | humidity | 90.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 942 | 70.07 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 977 | 70.11 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 7 |
| 991 | 70.11 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 992 | 70.11 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |