BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0453500 Os09g0453500|AK103120
         (467 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37130.1  | chr4:17489567-17491773 FORWARD LENGTH=514          316   2e-86

>AT4G37130.1 | chr4:17489567-17491773 FORWARD LENGTH=514
          Length = 513

 Score =  316 bits (810), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 229/400 (57%), Gaps = 24/400 (6%)

Query: 59  LMLYTTDGKPAGYNTKWEELHAESQKALLQIEDKIREYRDESERLDQCSRLHDSSISTVN 118
           L L+T D  PA Y+TKW +LH +SQK LLQIE+KI E+R ES+RLDQCSRL+DSS+S+  
Sbjct: 93  LYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDSSVSSEG 152

Query: 119 FENDASEIAQELGGTTTMMEREKASVQELMTVVNEMMRNTEFAIRSYMMLRPRFIRXXXX 178
           FE DAS I QELGG  T M+R+KA + ELM V  +M+RN E A+RS+MML+PRF      
Sbjct: 153 FEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRFPHWKQG 212

Query: 179 XXXXXXXXXXXXXXQSN-------QPVALAPTI---DFYSGIPKRPSHFMQQTINRFEKY 228
                          +N       Q  A+  T+   DFY GIPK+P+ F+ QT+ RFEKY
Sbjct: 213 GGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTVVRFEKY 272

Query: 229 LGECCKWIAELEQLVQMENNK--RQSASLESLPKVMSNVHDYFIYVASKVENLHQYVESL 286
           L EC +W+ ELEQL+ ++++K  R ++ LESLPKVMSNVHD+F++VA+KVE++HQY+ES+
Sbjct: 273 LNECRQWVEELEQLLALDSDKYSRHASLLESLPKVMSNVHDFFVHVAAKVESIHQYIESM 332

Query: 287 KTEYLHEQRRLGNANDPFLXXXXXXXXXXXXXXXXVHPTLHLPAPV---QPTTQIAGTVT 343
           +T YL +QRR G  +DPFL                VHPTLHLPA     QP+TQ+AG + 
Sbjct: 333 RTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQVAGLIA 392

Query: 344 S-------QPQQSLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFGTSGSA 396
           S        P Q+ +                                    +LFG S + 
Sbjct: 393 SSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPASGPSSSLFATPSSTAPTSSLFGPSPTP 452

Query: 397 QLSTPFGTVSTPTLGSTPAPSGFGNTTPSFASTPALGGTS 436
             +  FG+    T GST   S FG TTPS       GG +
Sbjct: 453 TQTPLFGSSPASTFGSTQ--SLFGQTTPSLTMPSQFGGAT 490



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.129    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,586,483
Number of extensions: 257363
Number of successful extensions: 1278
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1272
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 365
Effective length of database: 8,310,137
Effective search space: 3033200005
Effective search space used: 3033200005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)