Os09g0452200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0452200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 397.01 | 0.936 | 6.04 | -4.2 | 1.28 | 2.06 | -0.678 | -1.61 | -0.762 | 9.23 | 26.1 | 1371 | -- | -- |
| 398.44 | 0.93 | 5.98 | -3.76 | 1.34 | 1.98 | -0.411 | -- | -0.599 | 9.32 | 26.3 | 1269 | -- | -- |
| 397.09 | 0.928 | 6.03 | -4.19 | 1.46 | 2.22 | -- | -1.73 | -0.764 | 9.48 | 26.03 | 1205 | -- | -- |
| 399.36 | 0.931 | 5.98 | -3.75 | 1.36 | 1.98 | -- | -- | -0.585 | 9.37 | 26.3 | 1265 | -- | -- |
| 492.36 | 1.03 | 6.06 | -4.17 | -- | 1.83 | -- | -1.4 | -0.679 | -- | 26.4 | 1389 | -- | -- |
| 512.71 | 1.06 | 5.85 | -3.07 | 1.24 | -- | -0.438 | -- | -0.00319 | 8.53 | -- | -- | -- | -- |
| 513.28 | 1.06 | 5.85 | -3.08 | 1.25 | -- | -- | -- | -0.00397 | 8.44 | -- | -- | -- | -- |
| 493.88 | 1.04 | 6.02 | -3.75 | -- | 1.8 | -- | -- | -0.586 | -- | 26.2 | 1403 | -- | -- |
| 732.23 | 1.26 | 5.83 | -- | 1.62 | 1.08 | -- | -- | 0.071 | 9.17 | 25.8 | 966 | -- | -- |
| 600.12 | 1.14 | 5.88 | -3.08 | -- | -- | -- | -- | 0.00852 | -- | -- | -- | -- | -- |
| 763.97 | 1.29 | 5.77 | -- | 1.24 | -- | -- | -- | 0.34 | 8.62 | -- | -- | -- | -- |
| 823.71 | 1.34 | 5.87 | -- | -- | 1.03 | -- | -- | 0.0847 | -- | 27.1 | 1360 | -- | -- |
| 850 | 1.36 | 5.8 | -- | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 401.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 5 | 401.58 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 6 | 401.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 10 | 402.36 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 28 | 403.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 19 |
| 36 | 403.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 37 | 403.96 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 39 | 403.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 14 |
| 209 | 405.51 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 217 | 405.59 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 224 | 405.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 229 | 405.84 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 230 | 405.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 233 | 405.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 239 | 406.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 245 | 406.24 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 16 |
| 254 | 406.39 | temperature | 25 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 255 | 406.39 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 302 | 406.97 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 303 | 406.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 322 | 407.15 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 330 | 407.23 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 335 | 407.24 | humidity | 90 | 43200 | < th | dose independent | sin | 12 | NA |
| 391 | 407.57 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 395 | 407.59 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 420 | 407.80 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 422 | 407.81 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 423 | 407.81 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 455 | 407.97 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 467 | 407.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 472 | 408.01 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 514 | 408.18 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 645 | 408.77 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 665 | 408.88 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 684 | 409.00 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 706 | 409.07 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 12 |
| 720 | 409.15 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 732 | 409.19 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 745 | 409.24 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 778 | 409.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 821 | 409.54 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 840 | 409.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 863 | 409.75 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 893 | 409.91 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 896 | 409.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 14 |
| 952 | 410.14 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 977 | 410.25 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |