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Os09g0439200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ZIM domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.9 (0.0543) R2 : 0.456
β1 : -2.11 (0.203) R2dD : 0.14 R2D : 0.0299
β2 : 5.31 (0.386) R2dC : 1.72 R2C : -2.09
β3 : -7.83 (0.477) R2dE : 2.46 R2E : -1.48
β4 : 4.57 (0.639) R2dD*C : 0.0626 R2D*C : -0.00033
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.231 (0.116) R2dN8 : 0.00672 R2N8 : 0.011
σ : 1.01
deviance : 468.81
__
_____
C
peak time of C : 6.8
E
wheather : radiation
threshold : 0.169
memory length : 732
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
468.15 1.02 9.89 -2.06 5.44 -8 5.69 -1.55 0.253 6.78 0.17 732 -- --
468.81 1.01 9.9 -2.11 5.31 -7.83 4.57 -- 0.231 6.8 0.169 732 -- --
486.17 1.03 9.95 -2.15 5.3 -7.81 -- 4.94 0.198 6.77 0.1816 734 -- --
520.88 1.06 9.9 -1.97 4.86 -7.22 -- -- 0.272 6.89 0.17 734 -- --
516.16 1.06 10.1 -1.86 -- -3.64 -- 1.04 0.187 -- 0.4479 1811 -- --
611.69 1.16 9.97 -1.18 1.73 -- -0.463 -- 0.518 14.4 -- -- -- --
612.33 1.16 9.97 -1.2 1.72 -- -- -- 0.514 14.3 -- -- -- --
510.96 1.05 10.1 -2.05 -- -3.97 -- -- 0.206 -- 0.1689 1717 -- --
609.57 1.15 9.94 -- 3.89 -5.69 -- -- 0.42 6.58 0.4 671 -- --
788.19 1.31 9.99 -1.27 -- -- -- -- 0.472 -- -- -- -- --
650.11 1.19 9.94 -- 1.74 -- -- -- 0.648 14.3 -- -- -- --
598.75 1.14 10 -- -- -3.57 -- -- 0.244 -- 1.61 1811 -- --
830.71 1.35 9.96 -- -- -- -- -- 0.613 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 467.78 radiation 1 4320 < th dose dependent rect. 4 2
2 467.91 radiation 1 4320 < th dose dependent rect. 2 4
5 468.22 radiation 1 4320 < th dose dependent rect. 19 11
8 468.45 radiation 1 4320 < th dose dependent rect. 22 8
9 468.47 radiation 30 14400 < th dose dependent rect. 19 10
15 475.65 radiation 1 4320 > th dose independent rect. 18 13
30 477.69 radiation 1 4320 < th dose independent rect. 18 13
36 480.93 radiation 1 720 < th dose dependent rect. 5 22
37 481.46 radiation 1 4320 > th dose independent rect. 16 15
42 482.35 radiation 1 4320 < th dose dependent rect. 16 15
45 483.14 atmosphere 1005 43200 > th dose independent rect. 2 1
47 483.24 radiation 1 4320 < th dose independent rect. 16 15
49 483.33 atmosphere 1005 43200 < th dose independent rect. 2 1
50 483.45 radiation 40 4320 < th dose dependent rect. 18 5
51 483.61 radiation 1 720 < th dose dependent rect. 21 22
52 483.83 radiation 1 4320 < th dose dependent sin 11 NA
61 485.11 radiation 1 4320 > th dose independent sin 12 NA
89 486.75 radiation 1 4320 < th dose independent sin 12 NA
95 487.00 radiation 1 4320 < th dose dependent rect. 18 23
99 487.17 radiation 1 4320 > th dose independent rect. 18 23
102 487.31 radiation 1 720 < th dose dependent rect. 5 15
124 488.01 radiation 1 4320 < th dose independent rect. 18 23
129 488.10 radiation 1 4320 > th dose independent rect. 18 1
143 488.20 radiation 10 4320 < th dose independent rect. 18 9
149 488.40 radiation 1 14400 > th dose dependent rect. 18 11
170 489.38 humidity 90 43200 < th dose independent rect. 19 2
172 489.45 radiation 1 4320 < th dose independent rect. 5 1
183 489.88 radiation 1 720 < th dose dependent rect. 6 13
186 489.98 radiation 1 14400 > th dose dependent rect. 18 1
201 490.08 radiation 1 4320 < th dose dependent rect. 18 5
204 490.22 radiation 1 720 < th dose dependent rect. 13 23
207 490.26 radiation 1 4320 < th dose dependent rect. 18 3
233 490.80 radiation 1 4320 > th dose independent rect. 5 1
253 491.18 radiation 1 720 < th dose dependent rect. 9 23
256 491.25 radiation 1 720 < th dose dependent no NA NA
257 491.25 radiation 40 4320 < th dose dependent rect. 18 3
269 491.55 radiation 1 4320 < th dose independent rect. 18 5
272 491.58 radiation 20 14400 < th dose independent rect. 18 14
276 491.60 wind 5 43200 > th dose independent rect. 12 1
282 491.65 radiation 20 14400 < th dose independent rect. 20 12
285 491.70 radiation 20 14400 < th dose independent rect. 22 10
288 491.72 radiation 20 14400 < th dose independent rect. 6 2
290 491.76 radiation 20 14400 < th dose independent rect. 24 8
310 491.99 wind 5 43200 < th dose independent rect. 12 1
321 492.10 radiation 1 4320 < th dose independent rect. 18 3
330 492.21 radiation 1 14400 < th dose dependent rect. 7 7
418 493.25 temperature 15 43200 < th dose independent rect. 9 2
421 493.27 temperature 15 43200 > th dose independent rect. 9 2
424 493.29 atmosphere 1005 43200 < th dose independent rect. 16 12
434 493.48 humidity 80 43200 < th dose independent rect. 13 5
442 493.58 atmosphere 1005 43200 > th dose independent rect. 16 13
456 493.73 wind 3 43200 > th dose dependent rect. 13 1
462 493.77 wind 5 43200 < th dose independent rect. 11 3
472 493.87 wind 7 43200 < th dose dependent rect. 11 2
473 493.88 radiation 1 4320 < th dose dependent rect. 4 19
477 493.89 radiation 1 4320 < th dose dependent rect. 2 21
484 493.93 radiation 1 14400 > th dose independent rect. 7 7
507 494.01 radiation 1 4320 < th dose dependent rect. 4 23
515 494.04 radiation 1 4320 < th dose dependent no NA NA
519 494.05 radiation 1 4320 < th dose dependent rect. 22 23
525 494.07 radiation 1 4320 < th dose dependent rect. 20 23
536 494.13 radiation 1 14400 < th dose independent rect. 7 7
570 494.45 radiation 1 4320 < th dose dependent rect. 16 7
580 494.52 radiation 1 4320 < th dose dependent rect. 16 5
585 494.57 radiation 1 4320 > th dose independent rect. 18 20
600 494.64 atmosphere 1010 14400 < th dose independent rect. 19 1
603 494.65 atmosphere 1010 14400 > th dose independent rect. 19 1
608 494.69 radiation 1 4320 < th dose dependent rect. 16 11
619 494.78 atmosphere 1005 43200 < th dose independent rect. 11 18
621 494.78 radiation 1 4320 < th dose dependent rect. 4 13
634 494.83 atmosphere 1005 43200 > th dose independent rect. 24 20
646 494.88 atmosphere 1005 43200 < th dose independent rect. 8 21
655 494.93 atmosphere 1005 43200 < th dose independent sin 14 NA
663 494.95 humidity 80 43200 > th dose independent rect. 13 5
673 494.98 atmosphere 1005 43200 < th dose independent rect. 1 18
692 495.04 radiation 30 43200 < th dose independent rect. 16 11
701 495.07 wind 9 270 < th dose independent sin 11 NA
710 495.10 radiation 1 4320 > th dose independent rect. 5 14
727 495.14 atmosphere 1005 43200 > th dose independent sin 13 NA
764 495.26 atmosphere 1005 43200 > th dose independent rect. 8 21
770 495.28 radiation 30 43200 < th dose independent rect. 16 9
775 495.29 atmosphere 1005 43200 > th dose independent rect. 10 19
804 495.38 radiation 1 4320 < th dose independent rect. 18 20
811 495.38 radiation 1 720 < th dose dependent sin 23 NA
831 495.42 radiation 1 4320 < th dose dependent rect. 16 1
916 495.62 atmosphere 1005 43200 > th dose independent no NA NA
931 495.66 radiation 30 43200 < th dose independent rect. 16 7
942 495.71 radiation 1 4320 < th dose independent rect. 5 18
950 495.74 atmosphere 1005 43200 < th dose independent no NA NA
956 495.75 radiation 1 4320 < th dose independent rect. 5 16
971 495.78 radiation 1 4320 < th dose independent rect. 5 22