Os09g0437100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin responsive SAUR protein family protein.
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Os09g0437100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Auxin responsive SAUR protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.11 | 0.708 | 3.91 | -0.126 | 1.79 | 3 | 1.41 | -6.19 | -0.252 | 4.61 | 1.019 | 329 | 4.05 | 0.484 |
| 231.6 | 0.709 | 3.87 | 0.237 | 1.84 | 2.31 | 1.28 | -- | -0.247 | 4.66 | 0.938 | 327 | 3.9 | 0.621 |
| 231.83 | 0.709 | 3.9 | -0.11 | 1.77 | 2.97 | -- | -4.94 | -0.263 | 4.59 | 1.005 | 329 | 4.05 | 0.496 |
| 234.52 | 0.713 | 3.86 | 0.2 | 1.76 | 2.38 | -- | -- | -0.25 | 4.64 | 0.9159 | 323 | 3.91 | 0.633 |
| 355.3 | 0.878 | 3.9 | -0.0873 | -- | 3.81 | -- | -4.98 | -0.162 | -- | 1.376 | 234 | 4.08 | 0.417 |
| 327.87 | 0.849 | 3.89 | 0.378 | 2.39 | -- | 2.16 | -- | -0.423 | 4.89 | -- | -- | -- | -- |
| 339.91 | 0.863 | 3.89 | 0.371 | 2.41 | -- | -- | -- | -0.434 | 4.9 | -- | -- | -- | -- |
| 312.91 | 0.824 | 3.89 | 0.165 | -- | 3.26 | -- | -- | -0.206 | -- | 1.569 | 338 | 3.52 | 0.988 |
| 235.3 | 0.714 | 3.87 | -- | 1.77 | 2.39 | -- | -- | -0.277 | 4.64 | 0.9146 | 322 | 3.94 | 0.6 |
| 645.57 | 1.19 | 3.92 | 0.46 | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
| 343.55 | 0.867 | 3.9 | -- | 2.41 | -- | -- | -- | -0.475 | 4.9 | -- | -- | -- | -- |
| 313.1 | 0.824 | 3.87 | -- | -- | 3.33 | -- | -- | -0.148 | -- | 1.544 | 338 | 3.52 | 0.991 |
| 651.16 | 1.19 | 3.93 | -- | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.51 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 2 | 238.50 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 248.28 | wind | 3 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 7 | 249.85 | wind | 3 | 30 | < th | dose dependent | rect. | 3 | 8 |
| 8 | 249.87 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 22 | 250.01 | wind | 3 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 23 | 250.33 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 42 | 251.17 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 64 | 253.28 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 4 |
| 72 | 254.31 | humidity | 90 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 73 | 254.40 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 76 | 254.77 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 79 | 255.04 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 80 | 255.05 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 94 | 255.85 | wind | 3 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 103 | 256.66 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 110 | 257.06 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 111 | 257.14 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 112 | 257.32 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 115 | 257.81 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 11 |
| 118 | 257.90 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 124 | 258.45 | humidity | 90 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 138 | 259.33 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 151 | 260.21 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 14 |
| 158 | 260.32 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 207 | 262.74 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 214 | 263.01 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 3 |
| 223 | 263.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 225 | 263.36 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 229 | 263.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 283 | 264.49 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 1 |
| 285 | 264.51 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 318 | 265.39 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 1 |
| 422 | 268.29 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 3 |
| 455 | 269.17 | temperature | 30 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 473 | 269.30 | humidity | 90 | 270 | > th | dose independent | rect. | 1 | 4 |
| 521 | 269.88 | wind | 3 | 90 | < th | dose dependent | sin | 7 | NA |
| 619 | 271.21 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 648 | 271.75 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 687 | 272.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 713 | 272.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 5 |
| 717 | 272.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 736 | 272.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 738 | 272.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 752 | 272.90 | radiation | 40 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 788 | 273.15 | humidity | 70 | 1440 | < th | dose independent | sin | 12 | NA |
| 875 | 273.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 895 | 273.64 | humidity | 70 | 1440 | > th | dose independent | sin | 13 | NA |
| 952 | 273.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 961 | 273.85 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 1000 | 274.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |