Os09g0436800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Abortive infection protein family protein.
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Os09g0436800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Abortive infection protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.9 | 0.581 | 8.85 | 2.23 | 2.32 | -1.85 | -0.457 | 6.99 | 0.141 | 1.63 | 16.7 | 951 | 2.45 | -- |
| 206.84 | 0.67 | 8.99 | 1.09 | 2.68 | -1.65 | -1.41 | -- | -0.12 | 1.42 | 13.6 | 8160 | 3.2 | -- |
| 153.64 | 0.577 | 8.85 | 2.24 | 2.32 | -1.84 | -- | 7.12 | 0.136 | 1.63 | 16.6 | 948 | 2.43 | -- |
| 209.61 | 0.674 | 9 | 1.21 | 2.65 | -1.68 | -- | -- | -0.142 | 1.48 | 8.021 | 8240 | 4.26 | -- |
| 190.48 | 0.643 | 8.8 | 1.58 | -- | -4.47 | -- | 5.28 | 0.134 | -- | -2.893 | 1063 | 1.75 | -- |
| 247.3 | 0.737 | 9.12 | 0.301 | 2.7 | -- | -1.07 | -- | -0.624 | 1.28 | -- | -- | -- | -- |
| 252 | 0.743 | 9.11 | 0.338 | 2.7 | -- | -- | -- | -0.618 | 1.29 | -- | -- | -- | -- |
| 201.54 | 0.661 | 9 | 0.849 | -- | -4.03 | -- | -- | -0.253 | -- | -7.68 | 992 | 1.24 | -- |
| 232.23 | 0.71 | 9.07 | -- | 2.71 | -1.06 | -- | -- | -0.45 | 1.46 | 11.91 | 5353 | 5.02 | -- |
| 701.67 | 1.24 | 9.07 | 0.443 | -- | -- | -- | -- | -0.563 | -- | -- | -- | -- | -- |
| 255 | 0.747 | 9.12 | -- | 2.7 | -- | -- | -- | -0.656 | 1.3 | -- | -- | -- | -- |
| 218.12 | 0.688 | 9.04 | -- | -- | -3.72 | -- | -- | -0.414 | -- | -10.44 | 927 | 0.706 | -- |
| 706.85 | 1.24 | 9.08 | -- | -- | -- | -- | -- | -0.612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.90 | temperature | 15.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 2 | 163.19 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 12 | 163.29 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 7 |
| 14 | 163.48 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 16 | 163.84 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 2 |
| 24 | 165.46 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 34 | 166.46 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 36 | 166.49 | temperature | 20.0 | 720 | > th | dose independent | sin | 7 | NA |
| 38 | 166.60 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 52 | 167.16 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 57 | 167.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 61 | 167.77 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 65 | 167.95 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 66 | 167.95 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 67 | 167.97 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 69 | 167.98 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 73 | 168.02 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 74 | 168.04 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 78 | 168.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 82 | 168.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 83 | 168.16 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 85 | 168.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 88 | 168.21 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 6 |
| 89 | 168.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 97 | 168.40 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 100 | 168.46 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 102 | 168.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 110 | 168.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 111 | 168.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 115 | 168.61 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 116 | 168.62 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 117 | 168.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 120 | 168.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 121 | 168.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 128 | 168.73 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 130 | 168.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 131 | 168.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 138 | 168.84 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 145 | 168.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 146 | 168.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 148 | 168.93 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 15 |
| 159 | 169.02 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 182 | 169.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 17 |
| 183 | 169.22 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 184 | 169.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 186 | 169.23 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 187 | 169.23 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 190 | 169.24 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 192 | 169.25 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 197 | 169.27 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 200 | 169.29 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 204 | 169.30 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 210 | 169.33 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 211 | 169.34 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 218 | 169.38 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 219 | 169.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 220 | 169.38 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 225 | 169.39 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 229 | 169.39 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 232 | 169.42 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 234 | 169.42 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 242 | 169.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 253 | 169.52 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 255 | 169.53 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 261 | 169.59 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 277 | 169.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 282 | 169.65 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 288 | 169.68 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 304 | 169.72 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 309 | 169.73 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 311 | 169.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 316 | 169.75 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 331 | 169.79 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 344 | 169.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 369 | 169.86 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 376 | 169.86 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 378 | 169.87 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 379 | 169.87 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 405 | 169.90 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 424 | 169.91 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 22 | 12 |
| 498 | 169.99 | temperature | 15.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 533 | 170.02 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 534 | 170.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 539 | 170.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 553 | 170.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 575 | 170.06 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 625 | 170.10 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 7 | 6 |
| 635 | 170.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 638 | 170.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 645 | 170.12 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 646 | 170.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 658 | 170.13 | temperature | 20.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 759 | 170.20 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 766 | 170.21 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 790 | 170.22 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 12 |
| 836 | 170.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 871 | 170.26 | temperature | 20.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 967 | 170.31 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 7 | NA |