BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0436800 Os09g0436800|AK058729
         (299 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03140.2  | chr2:942000-950223 FORWARD LENGTH=1884             281   2e-76

>AT2G03140.2 | chr2:942000-950223 FORWARD LENGTH=1884
          Length = 1883

 Score =  281 bits (720), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 132/293 (45%), Positives = 194/293 (66%), Gaps = 3/293 (1%)

Query: 1    MSLTDRLISFLRISERPLFQRIMGFSFMVFVLWSPVVIPLLPTLVQSWTISSSTGIVGYA 60
            MSLTDRLI FL + E PL +R +GF  MV VLWSPVVIPLLPTL+Q+W+ S+ + +   A
Sbjct: 1495 MSLTDRLIQFLHMDEWPLLKRAVGFIGMVLVLWSPVVIPLLPTLLQNWSTSNPSRVAELA 1554

Query: 61   CIVGLYVSIMILVILWGKRIRGYENPVEQYGMNLASVS--RVQEFLQGLAGGITVVGLVH 118
             +VGLYV++ ILV+LWGKR+R YENP +QYG++L + +  ++QEFL+  AGGITVV L+ 
Sbjct: 1555 SVVGLYVAVFILVMLWGKRVRKYENPFKQYGLDLKASNKEKIQEFLKAFAGGITVVLLIQ 1614

Query: 119  SVSILLGFAAL-RAGSYSFVTRPLDLLKSSSNVLLLALRGFVTATSIAVVEEVVFRSWLP 177
             ++ + G A L R   +      +  LK     LLL +RGF  AT + +VEE++FRSW+P
Sbjct: 1615 FINAISGAAFLSRPPYFPHSFDAMKWLKGCGQFLLLIIRGFTAATFVVLVEELLFRSWMP 1674

Query: 178  EEVAVDLGYYSAILISGVAFSLIHRSXXXXXXXXXXXXXXXXXKQRTQGKLAAPIGLRSG 237
             E+A+DLGY+ +I+I+G+ F+L  RS                 ++R+QG L  PIGLR+G
Sbjct: 1675 AEIAIDLGYHQSIIITGLIFALFQRSLRSIPGFWLLSLALTWARERSQGNLIVPIGLRAG 1734

Query: 238  IMTASYLIQTSGIIQSKPGTPFWMISTYHLHPFDGVIGLSVCALLAILFFPQE 290
            I+ +S+++Q+ G +   P +P W+  +    PF GV+GL V   LA++ +P++
Sbjct: 1735 IIASSFILQSGGFLTYNPSSPVWIAGSRPSQPFSGVVGLMVSLALALILYPKQ 1787



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.140    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,636,120
Number of extensions: 207649
Number of successful extensions: 636
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 201
Effective length of database: 8,419,801
Effective search space: 1692380001
Effective search space used: 1692380001
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 111 (47.4 bits)