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Os09g0427300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.72 (0.024) R2 : 0.635
β1 : 0.925 (0.0879) R2dD : 0.092 R2D : 0.0274
β2 : 1.52 (0.0624) R2dC : 0.479 R2C : 0.425
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.624 (0.0512) R2dN8 : 0.159 R2N8 : 0.0697
σ : 0.451
deviance : 92.88
__
_____
C
peak time of C : 18.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.91 0.423 9.73 0.907 1.57 0.91 0.509 1.24 0.591 19.7 12.17 72 -- --
83.21 0.425 9.73 0.928 1.57 0.815 0.234 -- 0.608 19.6 9.999 70 -- --
81.56 0.421 9.73 0.901 1.57 0.89 -- 1.03 0.593 19.6 12.1 71 -- --
83.26 0.425 9.73 0.942 1.57 0.828 -- -- 0.601 19.7 6.899 70 -- --
127.73 0.526 9.7 1.05 -- 1.46 -- 0.429 0.515 -- -0.009726 792 -- --
92.61 0.451 9.72 0.931 1.52 -- 0.329 -- 0.623 18.7 -- -- -- --
92.88 0.451 9.72 0.925 1.52 -- -- -- 0.624 18.7 -- -- -- --
126.01 0.523 9.72 0.801 -- 1.55 -- -- 0.435 -- -97.89 796 -- --
105.69 0.479 9.75 -- 1.57 0.818 -- -- 0.492 19.7 9.969 70 -- --
214.02 0.684 9.69 0.89 -- -- -- -- 0.594 -- -- -- -- --
115.44 0.503 9.74 -- 1.51 -- -- -- 0.521 18.8 -- -- -- --
142.85 0.557 9.74 -- -- 1.59 -- -- 0.342 -- -87.85 799 -- --
234.93 0.715 9.71 -- -- -- -- -- 0.495 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.43 temperature 10.0 270 > th dose dependent rect. 21 15
5 68.50 temperature 10.0 90 > th dose dependent rect. 8 7
7 68.62 temperature 20.0 270 > th dose dependent rect. 9 1
12 69.19 temperature 20.0 270 > th dose dependent rect. 8 3
13 69.27 temperature 15.0 270 > th dose dependent rect. 7 5
14 69.28 temperature 10.0 10 > th dose dependent rect. 9 6
29 69.63 temperature 10.0 270 > th dose dependent rect. 6 7
37 69.92 temperature 10.0 30 > th dose dependent rect. 9 19
50 70.49 temperature 15.0 90 > th dose independent rect. 15 17
61 70.88 temperature 30.0 270 < th dose dependent rect. 3 3
66 71.01 temperature 15.0 10 > th dose independent rect. 15 18
73 71.15 radiation 30.0 90 < th dose independent rect. 3 6
75 71.19 wind 9.0 270 < th dose independent rect. 6 21
82 71.28 wind 5.0 270 < th dose independent rect. 3 3
86 71.32 temperature 30.0 90 < th dose dependent rect. 3 6
97 71.49 temperature 30.0 90 < th dose independent rect. 3 6
98 71.49 wind 1.0 90 > th dose independent rect. 8 7
101 71.53 precipitation 0.1 270 < th dose independent rect. 3 3
102 71.53 precipitation 0.1 270 < th dose dependent rect. 3 3
107 71.63 radiation 30.0 90 < th dose independent rect. 13 20
115 71.72 radiation 20.0 270 < th dose dependent rect. 2 6
119 71.78 radiation 10.0 270 < th dose dependent rect. 3 4
127 71.90 precipitation 0.1 90 < th dose independent rect. 8 7
128 71.90 precipitation 0.1 90 < th dose dependent rect. 8 7
135 71.96 radiation 30.0 270 < th dose dependent rect. 3 3
139 71.97 temperature 10.0 90 > th dose independent rect. 8 7
140 71.97 atmosphere 1015.0 90 < th dose independent rect. 8 7
145 71.98 temperature 10.0 270 > th dose independent rect. 3 3
147 71.98 temperature 30.0 270 < th dose independent rect. 3 3
148 71.98 humidity 50.0 270 > th dose independent rect. 3 3
151 71.98 atmosphere 995.0 270 > th dose independent rect. 3 3
152 71.98 atmosphere 1015.0 270 < th dose independent rect. 3 3
153 71.98 radiation 20.0 270 < th dose independent rect. 3 3
156 71.98 temperature 10.0 270 > th dose independent rect. 6 21
157 71.99 wind 9.0 90 < th dose independent rect. 9 18
158 72.00 radiation 10.0 30 > th dose independent rect. 9 6
160 72.03 wind 5.0 90 < th dose independent rect. 3 6
165 72.07 radiation 20.0 270 < th dose independent rect. 1 7
168 72.10 wind 9.0 270 < th dose independent rect. 5 23
170 72.12 atmosphere 995.0 90 > th dose independent rect. 15 17
174 72.15 atmosphere 995.0 90 > th dose independent rect. 8 7
178 72.20 precipitation 0.1 90 < th dose independent rect. 15 17
179 72.20 precipitation 0.1 90 < th dose dependent rect. 15 17
180 72.21 radiation 40.0 90 < th dose independent rect. 15 17
186 72.28 precipitation 0.1 90 < th dose independent rect. 3 6
187 72.28 precipitation 0.1 90 < th dose dependent rect. 3 6
191 72.31 wind 9.0 90 < th dose independent rect. 8 7
201 72.35 wind 9.0 270 < th dose independent rect. 7 19
203 72.37 humidity 60.0 90 > th dose independent rect. 3 6
207 72.41 wind 5.0 270 < th dose independent rect. 4 1
218 72.50 radiation 1.0 270 < th dose independent rect. 3 3
220 72.50 temperature 10.0 90 > th dose independent rect. 3 6
223 72.50 atmosphere 995.0 90 > th dose independent rect. 3 6
224 72.50 atmosphere 1015.0 90 < th dose independent rect. 3 6
226 72.50 temperature 10.0 90 > th dose independent rect. 9 18
229 72.56 temperature 10.0 10 > th dose independent rect. 9 6
231 72.56 atmosphere 995.0 10 > th dose independent rect. 9 6
232 72.56 atmosphere 1015.0 10 < th dose independent rect. 9 6
233 72.56 precipitation 0.1 10 < th dose independent rect. 9 6
236 72.56 precipitation 0.1 10 < th dose dependent rect. 9 6
249 72.64 precipitation 0.1 270 < th dose independent rect. 6 21
251 72.64 precipitation 0.1 270 < th dose dependent rect. 6 21
253 72.65 atmosphere 995.0 10 > th dose independent rect. 15 18
267 72.69 temperature 15.0 270 > th dose independent rect. 13 18
273 72.71 precipitation 0.1 270 < th dose independent rect. 4 1
274 72.71 precipitation 0.1 270 < th dose dependent rect. 4 1
276 72.72 temperature 15.0 270 > th dose independent rect. 11 21
290 72.77 temperature 10.0 1440 > th dose independent rect. 10 6
293 72.77 temperature 10.0 1440 > th dose independent rect. 16 18
298 72.78 wind 1.0 270 > th dose independent rect. 1 7
307 72.83 precipitation 0.1 270 < th dose independent rect. 1 7
310 72.83 precipitation 0.1 270 < th dose dependent rect. 1 7
311 72.84 wind 9.0 90 < th dose independent rect. 15 17
336 72.90 wind 7.0 270 < th dose independent rect. 1 7
343 72.92 radiation 1.0 270 < th dose dependent rect. 4 1
354 72.97 temperature 10.0 270 > th dose independent rect. 4 1
356 72.97 temperature 30.0 270 < th dose independent rect. 4 1
357 72.97 humidity 50.0 270 > th dose independent rect. 4 1
360 72.97 atmosphere 995.0 270 > th dose independent rect. 4 1
361 72.97 atmosphere 1010.0 270 < th dose independent rect. 4 1
363 72.97 radiation 20.0 270 < th dose independent rect. 4 1
376 72.97 temperature 10.0 270 > th dose independent rect. 5 23
392 73.00 wind 9.0 270 < th dose dependent rect. 3 3
397 73.02 radiation 40.0 270 < th dose dependent rect. 4 1
404 73.07 humidity 50.0 30 > th dose independent rect. 9 19
405 73.07 precipitation 0.1 10 < th dose independent rect. 9 19
409 73.07 precipitation 0.1 10 < th dose dependent rect. 9 19
412 73.08 radiation 40.0 10 < th dose independent rect. 15 18
424 73.12 radiation 1.0 270 > th dose dependent rect. 8 2
430 73.14 humidity 50.0 90 > th dose independent rect. 8 7
431 73.16 radiation 30.0 10 < th dose independent rect. 13 20
447 73.19 temperature 10.0 270 > th dose independent rect. 1 7
449 73.19 temperature 30.0 270 < th dose independent rect. 1 7
450 73.19 humidity 50.0 270 > th dose independent rect. 1 7
452 73.19 atmosphere 995.0 270 > th dose independent rect. 1 7
453 73.19 atmosphere 1015.0 270 < th dose independent rect. 1 7
460 73.20 radiation 1.0 270 < th dose independent rect. 4 1
468 73.23 wind 9.0 10 < th dose independent rect. 15 18
500 73.38 precipitation 0.1 270 < th dose independent rect. 7 19
502 73.38 precipitation 0.1 270 < th dose dependent rect. 7 19
511 73.39 temperature 15.0 270 > th dose independent rect. 11 10
515 73.40 wind 1.0 90 > th dose independent rect. 9 18
519 73.41 humidity 50.0 270 > th dose independent rect. 6 21
533 73.46 radiation 10.0 270 < th dose dependent rect. 3 10
545 73.50 wind 9.0 90 < th dose dependent rect. 3 6
553 73.53 temperature 10.0 1440 > th dose independent rect. 4 6
556 73.53 atmosphere 995.0 1440 > th dose independent rect. 4 6
557 73.53 atmosphere 1015.0 1440 < th dose independent rect. 4 6
559 73.53 temperature 10.0 1440 > th dose independent rect. 10 18
597 73.61 humidity 50.0 270 > th dose independent rect. 7 19
612 73.66 humidity 50.0 10 > th dose independent rect. 9 6
620 73.70 wind 9.0 270 < th dose dependent rect. 4 1
622 73.71 atmosphere 995.0 270 > th dose independent rect. 13 18
627 73.73 wind 1.0 270 > th dose independent rect. 9 1
632 73.74 temperature 15.0 270 > th dose independent rect. 3 15
637 73.76 humidity 50.0 270 > th dose independent rect. 9 1
671 73.86 temperature 10.0 270 > th dose independent rect. 9 1
672 73.86 atmosphere 995.0 270 > th dose independent rect. 9 1
673 73.86 atmosphere 1015.0 270 < th dose independent rect. 9 1
679 73.88 radiation 10.0 270 > th dose independent rect. 7 5
684 73.89 precipitation 0.1 270 < th dose independent rect. 9 1
686 73.89 wind 1.0 270 > th dose independent rect. 3 3
688 73.89 precipitation 0.1 270 < th dose dependent rect. 9 1
691 73.89 temperature 30.0 90 < th dose dependent rect. 3 8
698 73.92 wind 9.0 270 < th dose independent rect. 9 1
711 73.94 humidity 50.0 270 > th dose dependent rect. 3 3
722 73.97 humidity 50.0 270 > th dose dependent rect. 4 1
741 73.99 radiation 10.0 270 > th dose independent rect. 8 3
801 74.07 temperature 25.0 270 > th dose independent rect. 9 1
831 74.09 radiation 40.0 90 < th dose dependent rect. 13 20
849 74.11 temperature 25.0 270 > th dose independent rect. 8 3
853 74.12 atmosphere 995.0 30 > th dose independent rect. 9 19
878 74.18 wind 7.0 270 < th dose independent rect. 18 9
905 74.23 atmosphere 1015.0 270 < th dose dependent rect. 4 1
920 74.26 precipitation 0.1 270 < th dose independent rect. 3 15
924 74.26 precipitation 0.1 270 < th dose dependent rect. 3 15
936 74.29 radiation 1.0 270 < th dose independent rect. 3 9
938 74.29 atmosphere 1015.0 10 < th dose independent rect. 15 18
939 74.29 precipitation 0.1 270 < th dose independent rect. 13 18
942 74.29 precipitation 0.1 270 < th dose dependent rect. 13 18
959 74.32 atmosphere 1015.0 90 < th dose independent rect. 15 17
975 74.36 wind 1.0 270 > th dose independent rect. 8 3