BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0427300 Os09g0427300|AK121239
         (137 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63850.1  | chr5:25551494-25553374 FORWARD LENGTH=467           50   2e-07
AT1G77380.1  | chr1:29075201-29077252 REVERSE LENGTH=477           49   8e-07
AT5G09220.1  | chr5:2866867-2868863 FORWARD LENGTH=494             48   2e-06
AT5G49630.1  | chr5:20142681-20146441 REVERSE LENGTH=482           46   7e-06

>AT5G63850.1 | chr5:25551494-25553374 FORWARD LENGTH=467
          Length = 466

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 7/45 (15%)

Query: 63  PPSEAKVMKSATRLSVVTTTVFYMYMLCGCMNYT-----LPDNLL 102
           PP+E+K MK ATR+S+  TT F  YMLCGCM Y       P NLL
Sbjct: 254 PPAESKTMKIATRISIAVTTTF--YMLCGCMGYAAFGDKAPGNLL 296



>AT1G77380.1 | chr1:29075201-29077252 REVERSE LENGTH=477
          Length = 476

 Score = 48.9 bits (115), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 28/45 (62%), Gaps = 7/45 (15%)

Query: 63  PPSEAKVMKSATRLSVVTTTVFYMYMLCGCMNYTL-----PDNLL 102
           PPSE K MK AT +SV  TT+F  YMLCGCM Y       P NLL
Sbjct: 265 PPSEEKTMKKATLVSVSVTTMF--YMLCGCMGYAAFGDLSPGNLL 307



>AT5G09220.1 | chr5:2866867-2868863 FORWARD LENGTH=494
          Length = 493

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 7/45 (15%)

Query: 63  PPSEAKVMKSATRLSVVTTTVFYMYMLCGCMNY-----TLPDNLL 102
           PP+E+K MK AT++S+  TT+F  YMLCG M Y       P NLL
Sbjct: 281 PPAESKTMKKATKISIAVTTIF--YMLCGSMGYAAFGDAAPGNLL 323



>AT5G49630.1 | chr5:20142681-20146441 REVERSE LENGTH=482
          Length = 481

 Score = 45.8 bits (107), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 2/37 (5%)

Query: 59  IKAPPPSEAKVMKSATRLSVVTTTVFYMYMLCGCMNY 95
           +KA PPSE K MK A+ + V TTT F  YMLCGC+ Y
Sbjct: 267 LKAGPPSENKAMKRASLVGVSTTTFF--YMLCGCVGY 301



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.138    0.482 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,017,337
Number of extensions: 64250
Number of successful extensions: 203
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 202
Number of HSP's successfully gapped: 4
Length of query: 137
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 49
Effective length of database: 8,693,961
Effective search space: 426004089
Effective search space used: 426004089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 106 (45.4 bits)