FiT-DB / Search/ Help/ Sample detail

Os09g0416600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF868, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0182) R2 : 0.592
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.22 (0.0476) R2dC : 0.592 R2C : 0.59
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0445 (0.0382) R2dN8 : 0.00156 R2N8 : 0.00017
σ : 0.343
deviance : 53.67
__
_____
C
peak time of C : 5.85
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.95 0.301 11.2 0.582 0.6 2.13 1.55 2.25 0.161 16.7 0.923 688 -- --
41.96 0.302 11.2 0.64 0.44 1.91 -0.0857 -- 0.178 16.4 0.8937 684 -- --
41.48 0.3 11.2 0.616 0.308 1.75 -- 0.448 0.16 15.5 0.95 683 -- --
41.81 0.301 11.2 0.628 0.269 1.68 -- -- 0.17 15 0.97 680 -- --
42.34 0.303 11.2 0.608 -- 1.52 -- 0.724 0.166 -- 1 721 -- --
46.61 0.32 11.2 0.49 1.21 -- 0.51 -- 0.102 5.89 -- -- -- --
47.25 0.322 11.2 0.494 1.21 -- -- -- 0.0994 5.87 -- -- -- --
42.61 0.304 11.2 0.617 -- 1.51 -- -- 0.161 -- 1 717 -- --
51.49 0.334 11.2 -- 0.232 1.63 -- -- 0.11 14.6 2.724 673 -- --
123.71 0.52 11.2 0.53 -- -- -- -- 0.128 -- -- -- -- --
53.67 0.343 11.2 -- 1.22 -- -- -- 0.0445 5.85 -- -- -- --
51.78 0.335 11.2 -- -- 1.52 -- -- 0.111 -- 4.631 717 -- --
131.13 0.534 11.2 -- -- -- -- -- 0.0688 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.38 humidity 50.0 10 > th dose dependent rect. 17 15
4 38.60 radiation 10.0 720 < th dose dependent rect. 16 5
9 39.18 humidity 90.0 270 < th dose independent rect. 6 18
16 39.31 temperature 30.0 90 < th dose independent rect. 17 14
17 39.32 radiation 40.0 270 < th dose dependent rect. 15 14
19 39.36 precipitation 0.1 720 < th dose independent rect. 13 20
20 39.36 precipitation 0.1 720 < th dose dependent rect. 13 20
22 39.44 radiation 20.0 270 < th dose independent rect. 15 14
24 39.47 humidity 50.0 270 > th dose independent rect. 15 14
27 39.53 humidity 60.0 90 > th dose independent rect. 17 14
33 39.64 precipitation 0.1 720 < th dose independent rect. 12 23
34 39.64 precipitation 0.1 720 < th dose dependent rect. 12 23
35 39.68 radiation 1.0 720 < th dose dependent rect. 24 21
36 39.69 radiation 40.0 720 < th dose dependent rect. 15 6
38 39.74 humidity 70.0 1440 > th dose independent rect. 17 1
44 39.83 precipitation 0.1 720 < th dose independent rect. 6 18
45 39.83 precipitation 0.1 720 < th dose dependent rect. 6 18
52 39.91 radiation 10.0 720 < th dose dependent rect. 16 13
53 39.92 precipitation 0.1 720 < th dose independent rect. 12 15
54 39.92 precipitation 0.1 720 < th dose dependent rect. 12 15
55 39.94 radiation 1.0 720 < th dose independent rect. 24 21
57 39.95 radiation 1.0 270 < th dose independent rect. 22 22
67 40.03 radiation 1.0 270 < th dose dependent rect. 1 19
72 40.09 radiation 10.0 720 < th dose independent rect. 16 5
78 40.15 radiation 1.0 720 > th dose independent rect. 12 21
93 40.24 precipitation 0.1 720 < th dose independent rect. 15 9
94 40.24 precipitation 0.1 720 < th dose dependent rect. 15 9
99 40.25 humidity 70.0 90 > th dose dependent rect. 1 22
121 40.36 wind 7.0 270 < th dose independent rect. 20 13
122 40.36 humidity 50.0 720 > th dose dependent rect. 17 4
126 40.38 precipitation 0.1 720 < th dose independent rect. 3 15
128 40.38 precipitation 0.1 720 < th dose dependent rect. 3 15
135 40.43 humidity 90.0 270 < th dose independent rect. 19 21
141 40.45 radiation 1.0 270 > th dose independent rect. 17 22
150 40.48 humidity 90.0 90 < th dose independent rect. 21 20
154 40.49 humidity 70.0 90 > th dose dependent rect. 1 20
158 40.50 humidity 50.0 720 > th dose dependent rect. 24 21
170 40.55 humidity 70.0 10 > th dose independent rect. 17 15
173 40.56 atmosphere 995.0 270 > th dose independent rect. 16 13
182 40.59 precipitation 0.1 720 < th dose independent rect. 21 20
183 40.59 precipitation 0.1 720 < th dose dependent rect. 21 20
184 40.60 humidity 70.0 1440 > th dose independent rect. 16 3
197 40.63 atmosphere 1015.0 90 < th dose independent rect. 17 14
205 40.65 humidity 70.0 1440 < th dose independent rect. 16 2
213 40.69 humidity 90.0 270 < th dose independent rect. 20 13
233 40.75 precipitation 0.1 720 < th dose independent rect. 12 7
234 40.75 wind 9.0 270 < th dose independent rect. 5 11
237 40.75 precipitation 0.1 720 < th dose dependent rect. 12 7
249 40.78 radiation 1.0 90 > th dose independent rect. 7 12
261 40.79 precipitation 0.1 270 < th dose independent rect. 5 11
265 40.79 precipitation 0.1 270 < th dose dependent rect. 5 11
269 40.80 radiation 1.0 720 < th dose independent rect. 6 15
272 40.81 radiation 1.0 30 > th dose independent rect. 8 10
281 40.82 precipitation 0.1 270 < th dose independent rect. 20 13
284 40.82 precipitation 0.1 270 < th dose dependent rect. 20 13
293 40.84 humidity 80.0 90 > th dose independent rect. 1 21
295 40.85 radiation 1.0 720 < th dose independent rect. 16 13
305 40.89 temperature 15.0 270 > th dose independent rect. 5 11
318 40.91 precipitation 0.1 270 < th dose independent rect. 4 23
320 40.91 precipitation 0.1 270 < th dose dependent rect. 4 23
337 40.94 humidity 50.0 270 > th dose independent rect. 1 19
364 40.96 radiation 1.0 720 < th dose dependent rect. 6 23
366 40.97 atmosphere 1015.0 270 < th dose independent rect. 5 11
367 40.97 temperature 10.0 270 > th dose independent rect. 16 13
403 41.00 wind 9.0 90 < th dose independent rect. 7 10
420 41.03 temperature 15.0 90 > th dose independent rect. 7 10
421 41.03 atmosphere 1015.0 270 < th dose independent rect. 15 14
424 41.04 precipitation 0.1 90 < th dose independent rect. 7 10
428 41.04 precipitation 0.1 90 < th dose dependent rect. 7 10
443 41.05 radiation 1.0 720 < th dose dependent rect. 15 18
454 41.06 humidity 90.0 270 < th dose dependent rect. 20 13
468 41.08 radiation 1.0 720 < th dose dependent rect. 6 15
472 41.08 humidity 50.0 720 > th dose dependent rect. 9 20
495 41.11 radiation 1.0 720 < th dose independent rect. 6 23
499 41.12 humidity 90.0 90 < th dose independent rect. 7 10
519 41.15 humidity 90.0 270 < th dose independent rect. 20 4
537 41.16 atmosphere 995.0 270 > th dose independent rect. 5 11
551 41.18 temperature 10.0 270 > th dose independent rect. 9 11
552 41.18 atmosphere 1015.0 270 < th dose independent rect. 9 11
553 41.18 temperature 10.0 270 > th dose independent rect. 20 13
554 41.18 humidity 50.0 270 > th dose independent rect. 20 13
555 41.18 atmosphere 995.0 270 > th dose independent rect. 20 13
566 41.19 radiation 1.0 270 > th dose independent rect. 5 11
575 41.20 temperature 30.0 270 < th dose independent rect. 20 13
593 41.21 atmosphere 995.0 90 > th dose independent rect. 7 10
597 41.21 precipitation 0.1 720 < th dose independent rect. 20 23
604 41.21 precipitation 0.1 720 < th dose dependent rect. 20 23
621 41.24 temperature 10.0 1440 > th dose independent rect. 9 9
626 41.24 temperature 10.0 1440 > th dose independent rect. 18 15
629 41.24 humidity 50.0 1440 > th dose independent rect. 18 15
639 41.25 radiation 40.0 270 < th dose independent rect. 20 13
652 41.26 radiation 1.0 720 > th dose independent rect. 12 6
676 41.29 atmosphere 1015.0 90 < th dose independent rect. 7 10
695 41.31 radiation 1.0 270 > th dose independent sin 2 NA
701 41.31 humidity 50.0 720 > th dose dependent rect. 9 12
718 41.33 temperature 30.0 30 < th dose dependent rect. 17 4
730 41.34 humidity 70.0 90 > th dose dependent rect. 17 18
742 41.36 radiation 1.0 270 < th dose dependent sin 2 NA
747 41.37 temperature 30.0 270 < th dose independent rect. 15 4
771 41.39 wind 1.0 90 > th dose independent rect. 7 10
789 41.40 humidity 50.0 270 > th dose independent rect. 10 10
799 41.40 humidity 80.0 270 > th dose dependent rect. 7 23
827 41.43 wind 9.0 270 < th dose independent rect. 16 13
860 41.46 temperature 30.0 270 < th dose independent rect. 17 1
873 41.47 wind 7.0 270 < th dose independent rect. 5 20
918 41.50 humidity 70.0 1440 > th dose independent rect. 16 15
942 41.51 humidity 90.0 270 < th dose independent rect. 12 23
997 41.54 humidity 70.0 1440 > th dose independent rect. 14 16