Os09g0410700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0410700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.32 | 0.456 | 11.3 | -0.306 | 0.938 | -0.911 | -0.414 | -0.188 | -0.498 | 22.9 | 73 | 1217 | -- | -- |
| 94.38 | 0.452 | 11.3 | -0.333 | 0.93 | -0.924 | -0.381 | -- | -0.506 | 22.9 | 72.98 | 1210 | -- | -- |
| 94.98 | 0.454 | 11.3 | -0.31 | 0.936 | -0.912 | -- | -0.0369 | -0.502 | 22.9 | 72.76 | 1212 | -- | -- |
| 94.98 | 0.454 | 11.3 | -0.316 | 0.936 | -0.914 | -- | -- | -0.504 | 22.9 | 72.89 | 1212 | -- | -- |
| 120.89 | 0.512 | 11.3 | -0.379 | -- | -1.55 | -- | 0.33 | -0.54 | -- | 73.01 | 1008 | -- | -- |
| 122.4 | 0.519 | 11.3 | -0.151 | 1.14 | -- | -0.216 | -- | -0.391 | 23.3 | -- | -- | -- | -- |
| 122.6 | 0.519 | 11.3 | -0.142 | 1.15 | -- | -- | -- | -0.39 | 23.3 | -- | -- | -- | -- |
| 120.8 | 0.512 | 11.3 | -0.347 | -- | -1.53 | -- | -- | -0.527 | -- | 73.02 | 1009 | -- | -- |
| 97.54 | 0.46 | 11.3 | -- | 0.94 | -0.868 | -- | -- | -0.467 | 22.9 | 73 | 1210 | -- | -- |
| 204.66 | 0.668 | 11.3 | -0.114 | -- | -- | -- | -- | -0.38 | -- | -- | -- | -- | -- |
| 123.13 | 0.519 | 11.3 | -- | 1.14 | -- | -- | -- | -0.375 | 23.3 | -- | -- | -- | -- |
| 123.85 | 0.518 | 11.3 | -- | -- | -1.49 | -- | -- | -0.479 | -- | 73.03 | 990 | -- | -- |
| 205 | 0.668 | 11.3 | -- | -- | -- | -- | -- | -0.367 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.10 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 19 | 83.57 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 27 | 85.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 34 | 86.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 14 |
| 35 | 86.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 45 | 87.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 47 | 87.86 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 58 | 88.38 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 2 |
| 59 | 88.38 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 65 | 88.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 69 | 88.78 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 4 |
| 70 | 88.78 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 71 | 88.84 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 75 | 88.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 4 |
| 85 | 89.20 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 90 | 89.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 92 | 89.27 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 93 | 89.27 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 96 | 89.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 97 | 89.27 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 99 | 89.27 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 102 | 89.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 105 | 89.29 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 108 | 89.32 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 119 | 89.45 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 128 | 89.70 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 146 | 89.82 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 8 |
| 149 | 89.84 | wind | 7.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 158 | 89.95 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 160 | 89.95 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 161 | 89.95 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 164 | 89.95 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 165 | 89.95 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 167 | 89.95 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 170 | 89.95 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 202 | 90.24 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 206 | 90.29 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 215 | 90.41 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 225 | 90.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 7 |
| 315 | 90.95 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 317 | 90.97 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 318 | 90.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 321 | 90.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 325 | 90.97 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 330 | 90.97 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 331 | 90.97 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 335 | 90.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 339 | 90.98 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 340 | 90.99 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 345 | 91.10 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 21 |
| 377 | 91.45 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 379 | 91.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 380 | 91.47 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 384 | 91.49 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 385 | 91.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 386 | 91.50 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 387 | 91.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 388 | 91.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 394 | 91.54 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 405 | 91.61 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 10 |
| 406 | 91.61 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 408 | 91.61 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 410 | 91.63 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 416 | 91.72 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 418 | 91.72 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 419 | 91.72 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 426 | 91.78 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 428 | 91.80 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 433 | 91.84 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 8 |
| 434 | 91.84 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 20 |
| 436 | 91.84 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 441 | 91.88 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 8 |
| 443 | 91.88 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 446 | 91.90 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 19 | 7 |
| 461 | 91.97 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 482 | 92.16 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 492 | 92.23 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 494 | 92.25 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 9 |
| 504 | 92.31 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 507 | 92.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 523 | 92.59 | radiation | 1.0 | 270 | < th | dose independent | rect. | 12 | 12 |
| 529 | 92.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 571 | 92.88 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 577 | 92.91 | radiation | 1.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 578 | 92.91 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 597 | 93.01 | radiation | 1.0 | 270 | < th | dose dependent | sin | 21 | NA |
| 608 | 93.05 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 2 | 17 |
| 609 | 93.05 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 626 | 93.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 636 | 93.10 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 637 | 93.11 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 650 | 93.17 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 658 | 93.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 661 | 93.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 688 | 93.48 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 7 |
| 717 | 93.65 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 20 |
| 731 | 93.73 | radiation | 1.0 | 270 | < th | dose independent | sin | 20 | NA |
| 735 | 93.78 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 9 |
| 748 | 93.83 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 768 | 93.93 | temperature | 15.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 775 | 93.94 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 782 | 93.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 17 |
| 785 | 93.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 809 | 94.07 | humidity | 70.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 815 | 94.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 827 | 94.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 833 | 94.18 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 835 | 94.20 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 844 | 94.24 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 850 | 94.27 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 862 | 94.35 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 9 | 17 |
| 864 | 94.37 | radiation | 1.0 | 90 | > th | dose independent | sin | 4 | NA |
| 943 | 94.69 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 962 | 94.78 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 975 | 94.81 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 14 | 12 |
| 980 | 94.85 | radiation | 1.0 | 270 | > th | dose independent | sin | 20 | NA |
| 996 | 94.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 8 |