Os09g0401300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZIM domain containing protein.
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Os09g0401300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZIM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.88 | 0.308 | 11.4 | -0.175 | 2.06 | 0.721 | -0.0451 | 1.68 | -0.0452 | 6.88 | 27.97 | 109 | -- | -- |
| 47.03 | 0.322 | 11.4 | 0.0897 | 2.11 | 0.641 | 0.0956 | -- | 0.0194 | 6.89 | 27.97 | 109 | -- | -- |
| 42.88 | 0.305 | 11.4 | -0.174 | 2.06 | 0.723 | -- | 1.67 | -0.0437 | 6.88 | 27.86 | 110 | -- | -- |
| 46.97 | 0.319 | 11.4 | 0.105 | 2.07 | 0.662 | -- | -- | 0.0222 | 6.85 | 28.28 | 111 | -- | -- |
| 200.84 | 0.66 | 11.4 | 0.117 | -- | 2.46 | -- | 2.39 | 0.181 | -- | 36.96 | 414 | -- | -- |
| 52.87 | 0.341 | 11.4 | -0.0647 | 2.18 | -- | 0.164 | -- | -0.117 | 6.55 | -- | -- | -- | -- |
| 52.94 | 0.341 | 11.4 | -0.0623 | 2.18 | -- | -- | -- | -0.118 | 6.55 | -- | -- | -- | -- |
| 204.49 | 0.666 | 11.4 | 0.527 | -- | 2.53 | -- | -- | 0.282 | -- | 42.57 | 417 | -- | -- |
| 47.16 | 0.32 | 11.4 | -- | 2.09 | 0.621 | -- | -- | 0.00567 | 6.85 | 28.15 | 70 | -- | -- |
| 301.08 | 0.811 | 11.4 | -0.00882 | -- | -- | -- | -- | -0.0728 | -- | -- | -- | -- | -- |
| 53.04 | 0.341 | 11.4 | -- | 2.18 | -- | -- | -- | -0.111 | 6.55 | -- | -- | -- | -- |
| 211.28 | 0.677 | 11.4 | -- | -- | 2.35 | -- | -- | 0.202 | -- | 40.59 | 414 | -- | -- |
| 301.08 | 0.81 | 11.4 | -- | -- | -- | -- | -- | -0.0719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.29 | temperature | 10 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 2 | 42.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 7 | 42.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 8 | 42.54 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 21 |
| 13 | 42.64 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 25 | 42.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 12 |
| 44 | 43.09 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 49 | 43.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 61 | 43.29 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 66 | 43.34 | temperature | 20 | 90 | > th | dose dependent | sin | 9 | NA |
| 79 | 43.41 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 91 | 43.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 123 | 43.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 125 | 43.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 127 | 43.64 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 23 |
| 137 | 43.67 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 190 | 43.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 214 | 43.90 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 12 |
| 237 | 43.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 18 |
| 244 | 43.95 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 22 |
| 267 | 43.99 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 278 | 44.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 370 | 44.14 | temperature | 30 | 90 | < th | dose dependent | sin | 10 | NA |
| 425 | 44.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 446 | 44.22 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 13 |
| 447 | 44.22 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 503 | 44.29 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 23 |
| 522 | 44.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 531 | 44.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 15 |
| 535 | 44.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 537 | 44.33 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 21 |
| 569 | 44.37 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 23 |
| 607 | 44.41 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 644 | 44.44 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 654 | 44.46 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 23 |
| 706 | 44.53 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 736 | 44.56 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 23 |
| 743 | 44.56 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 754 | 44.58 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 778 | 44.61 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 818 | 44.66 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 846 | 44.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 929 | 44.77 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 23 |