Os09g0371300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
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Os09g0371300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.98 | 0.54 | 3.26 | 0.416 | 0.452 | 0.595 | 0.728 | 1.99 | 0.503 | 2.23 | 39.02 | 1331 | -- | -- |
| 137.74 | 0.547 | 3.25 | 0.621 | 0.453 | 0.751 | 0.611 | -- | 0.546 | 2.3 | 37.91 | 1339 | -- | -- |
| 133.35 | 0.538 | 3.26 | 0.405 | 0.405 | 0.519 | -- | 1.89 | 0.497 | 2.85 | 46.63 | 1449 | -- | -- |
| 138.68 | 0.548 | 3.25 | 0.61 | 0.436 | 0.72 | -- | -- | 0.54 | 2.77 | 35.56 | 1364 | -- | -- |
| 139.25 | 0.55 | 3.25 | 0.444 | -- | 0.691 | -- | 1.58 | 0.524 | -- | 39.94 | 1730 | -- | -- |
| 149.93 | 0.574 | 3.25 | 0.576 | 0.358 | -- | 0.418 | -- | 0.516 | 2.46 | -- | -- | -- | -- |
| 150.51 | 0.575 | 3.25 | 0.565 | 0.363 | -- | -- | -- | 0.513 | 2.8 | -- | -- | -- | -- |
| 142.7 | 0.556 | 3.24 | 0.601 | -- | 0.833 | -- | -- | 0.555 | -- | 33.99 | 1784 | -- | -- |
| 145.73 | 0.562 | 3.26 | -- | 0.488 | 0.917 | -- | -- | 0.516 | 2.15 | -76.06 | 2588 | -- | -- |
| 158.14 | 0.588 | 3.25 | 0.581 | -- | -- | -- | -- | 0.522 | -- | -- | -- | -- | -- |
| 158.92 | 0.59 | 3.27 | -- | 0.374 | -- | -- | -- | 0.45 | 2.81 | -- | -- | -- | -- |
| 150.39 | 0.571 | 3.24 | -- | -- | 1.06 | -- | -- | 0.576 | -- | 73.13 | 1774 | -- | -- |
| 167.04 | 0.603 | 3.27 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.61 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 2 | 126.61 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 3 | 129.69 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 4 | 129.69 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 5 | 130.03 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 130.17 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 7 |
| 7 | 130.25 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 8 | 130.25 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 7 |
| 12 | 130.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 14 | 130.45 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 15 |
| 22 | 130.61 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 23 | 130.61 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 26 | 130.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 27 | 130.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 30 | 130.72 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 31 | 130.74 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 32 | 130.75 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 42 | 130.86 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 59 | 131.00 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 102 | 131.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 105 | 131.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 107 | 131.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 120 | 131.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 137 | 131.27 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 12 |
| 140 | 131.27 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 146 | 131.31 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 157 | 131.34 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 179 | 131.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 192 | 131.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 12 |
| 208 | 131.45 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 16 |
| 210 | 131.45 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 215 | 131.47 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 232 | 131.50 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 251 | 131.54 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 23 |
| 252 | 131.54 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 257 | 131.54 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 261 | 131.55 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 264 | 131.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 265 | 131.56 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 267 | 131.57 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 282 | 131.57 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 293 | 131.59 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 297 | 131.60 | humidity | 60.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 307 | 131.61 | humidity | 60.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 309 | 131.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 12 |
| 322 | 131.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 428 | 131.73 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 438 | 131.75 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 446 | 131.75 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 447 | 131.75 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 462 | 131.78 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 20 |
| 484 | 131.79 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 19 |
| 486 | 131.80 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 522 | 131.84 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 527 | 131.85 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 562 | 131.89 | humidity | 90.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 579 | 131.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 677 | 131.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 682 | 131.98 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 685 | 131.99 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 711 | 132.01 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 716 | 132.02 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 729 | 132.03 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 752 | 132.05 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 818 | 132.11 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 957 | 132.19 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 978 | 132.21 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 981 | 132.21 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 16 |