Os09g0363600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 domain containing protein.
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Os09g0363600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.67 | 0.277 | 10.7 | 1.05 | 1.08 | 0.472 | 0.307 | 0.226 | 0.34 | 1.14 | 70 | 1303 | -- | -- |
| 34.58 | 0.274 | 10.7 | 1.06 | 1.08 | 0.486 | 0.252 | -- | 0.354 | 1.15 | 71 | 1299 | -- | -- |
| 35.01 | 0.276 | 10.7 | 1.05 | 1.09 | 0.473 | -- | 0.139 | 0.343 | 1.11 | 70.15 | 1290 | -- | -- |
| 34.86 | 0.275 | 10.7 | 1.06 | 1.08 | 0.488 | -- | -- | 0.35 | 1.12 | 71.07 | 1296 | -- | -- |
| 60.83 | 0.365 | 10.7 | 1.05 | -- | 0.635 | -- | 0.114 | 0.274 | -- | 79 | 3185 | -- | -- |
| 43.56 | 0.309 | 10.7 | 0.967 | 1 | -- | 0.168 | -- | 0.279 | 1.08 | -- | -- | -- | -- |
| 43.68 | 0.309 | 10.7 | 0.961 | 1 | -- | -- | -- | 0.278 | 1.07 | -- | -- | -- | -- |
| 60.92 | 0.365 | 10.7 | 1.05 | -- | 0.636 | -- | -- | 0.274 | -- | 79 | 3185 | -- | -- |
| 45.46 | 0.314 | 10.8 | -- | 0.993 | 0.931 | -- | -- | 0.145 | 1.42 | 60 | 30143 | -- | -- |
| 105.9 | 0.481 | 10.7 | 0.999 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 68.04 | 0.386 | 10.7 | -- | 1.02 | -- | -- | -- | 0.171 | 1.11 | -- | -- | -- | -- |
| 88.2 | 0.439 | 10.7 | -- | -- | 0.621 | -- | -- | 0.182 | -- | 80.83 | 3172 | -- | -- |
| 132.24 | 0.537 | 10.7 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.56 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 34.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 34.72 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 4 | 34.77 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 34.85 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 8 | 34.86 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 9 | 34.87 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 12 | 34.89 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 15 | 34.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 24 | 34.97 | humidity | 70.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 27 | 34.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 32 | 35.02 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 34 | 35.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 36 | 35.04 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 40 | 35.05 | humidity | 60.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 60 | 35.10 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 61 | 35.11 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 62 | 35.11 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 95 | 35.17 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 99 | 35.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 105 | 35.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 106 | 35.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 107 | 35.20 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 108 | 35.20 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 136 | 35.20 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 176 | 35.22 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 18 |
| 180 | 35.22 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 184 | 35.23 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 200 | 35.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 206 | 35.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 208 | 35.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 218 | 35.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 223 | 35.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 249 | 35.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 281 | 35.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 298 | 35.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 318 | 35.29 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 12 | 22 |
| 322 | 35.30 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 359 | 35.31 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 384 | 35.32 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 425 | 35.35 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 431 | 35.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 456 | 35.39 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 458 | 35.39 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 472 | 35.39 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 473 | 35.39 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 475 | 35.40 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 495 | 35.41 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 506 | 35.41 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 510 | 35.42 | humidity | 70.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 537 | 35.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 543 | 35.43 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 550 | 35.43 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 583 | 35.45 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 626 | 35.47 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 671 | 35.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 685 | 35.49 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 686 | 35.49 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 702 | 35.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 770 | 35.52 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 777 | 35.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 788 | 35.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 789 | 35.53 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 845 | 35.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 899 | 35.57 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 900 | 35.57 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 913 | 35.57 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 988 | 35.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 13 |