BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0363600 Os09g0363600|AK111628
(279 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19430.1 | chr2:8415217-8417740 FORWARD LENGTH=368 223 1e-58
AT3G49660.1 | chr3:18413690-18415223 FORWARD LENGTH=318 58 5e-09
AT1G49040.1 | chr1:18139419-18148826 REVERSE LENGTH=1188 56 2e-08
AT5G50230.1 | chr5:20448632-20450855 REVERSE LENGTH=510 55 4e-08
AT5G51980.2 | chr5:21113650-21115902 REVERSE LENGTH=444 51 9e-07
AT5G25150.1 | chr5:8677117-8682058 FORWARD LENGTH=670 50 9e-07
AT2G41500.1 | chr2:17304319-17306855 REVERSE LENGTH=555 50 2e-06
AT1G73720.1 | chr1:27725059-27729722 FORWARD LENGTH=512 50 2e-06
AT1G11160.1 | chr1:3733406-3739363 FORWARD LENGTH=1022 49 3e-06
AT4G25440.1 | chr4:13007107-13009381 REVERSE LENGTH=431 49 3e-06
AT3G16650.1 | chr3:5671133-5675106 FORWARD LENGTH=480 48 5e-06
AT5G08390.1 | chr5:2701448-2706910 FORWARD LENGTH=840 48 5e-06
AT4G15900.1 | chr4:9023775-9027443 FORWARD LENGTH=487 48 6e-06
AT2G21390.1 | chr2:9152428-9156577 FORWARD LENGTH=1219 48 6e-06
>AT2G19430.1 | chr2:8415217-8417740 FORWARD LENGTH=368
Length = 367
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 153/265 (57%), Gaps = 5/265 (1%)
Query: 10 DARGWDEAAYRRGILRERDLSCRTLFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 69
DA W+E YR IL+ER++ RT+FR
Sbjct: 4 DATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLNSLV 63
Query: 70 XXXXXHPTPQTHPDAAVSLVDPVCIVQAHSGPAYDVRFYPDSQQPLLFSXXXXXXXXXXX 129
+ V + +P +V+AH GPAYDV+FY + + LL S
Sbjct: 64 SQSASFGYSKGQD---VMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDDGRVRGWK 120
Query: 130 XHEMQSCLVPLSLQGDHLEPVLDLVNPQHEGPWGARSPIPENNAIAINKQEGSVYAAAGD 189
E V L L+ +HL+P+L+L+NPQH+GPWGA SP+PE NA++++ Q GSV+ AAGD
Sbjct: 121 WREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGD 180
Query: 190 ACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGTARIWDCRSGKCTQVIR 249
+CAYCWDVESGK KMTFKGH+DYLH++ R + Q++TGSEDGTARIWDC++GKC +VI
Sbjct: 181 SCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIG 240
Query: 250 PVKNKIFEGSWVSCVAIDASESWLV 274
K VS +A+D SESWLV
Sbjct: 241 SQDKK--SRLRVSSMALDGSESWLV 263
>AT3G49660.1 | chr3:18413690-18415223 FORWARD LENGTH=318
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 174 IAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGT 233
+A + + +A+ D WDVE+G T GHT+Y + + +V+GS D T
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 234 ARIWDCRSGKCTQVI 248
RIWD +GKC +V+
Sbjct: 137 VRIWDVTTGKCLKVL 151
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 174 IAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGT 233
+ N Q + + + D WDV +GKC H+D + ++ +V+ S DG
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 234 ARIWDCRSGKCTQVI 248
RIWD +G C + +
Sbjct: 179 CRIWDSGTGHCVKTL 193
>AT1G49040.1 | chr1:18139419-18148826 REVERSE LENGTH=1188
Length = 1187
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 173 AIAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDG 232
++ + G + AA D A WD+ SGK KGHT ++ SI R ++TGS+D
Sbjct: 985 SLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSI--RMVEDTLITGSDDW 1042
Query: 233 TARIWDCRSGKCTQVI 248
TAR+W G C V+
Sbjct: 1043 TARVWSVSRGSCDAVL 1058
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 175 AINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGTA 234
+I E ++ + D A W V G C H + S+ ++ ++TGS DG
Sbjct: 1027 SIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLL 1086
Query: 235 RIWDCRSGKCTQVIRPVKNKIFEGSWVSCVAIDASESWL 273
R W+ G I+ VKN S S ++I+A E+WL
Sbjct: 1087 RFWENDEGG----IKCVKNITLHSS--SILSINAGENWL 1119
>AT5G50230.1 | chr5:20448632-20450855 REVERSE LENGTH=510
Length = 509
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 174 IAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVRE-ANRQVVTGSEDG 232
+A+ SV AA + WDV SG+ + T GHTD + ++ V + ++R VV+ + D
Sbjct: 273 MAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDR 332
Query: 233 TARIWDCRSGKCTQVIRPVKN 253
T ++WD G CT + N
Sbjct: 333 TIKLWDLHKGYCTNTVLFTSN 353
>AT5G51980.2 | chr5:21113650-21115902 REVERSE LENGTH=444
Length = 443
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 188 GDACAY--CWDV-ESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGTARIWDCRSGKC 244
GD C Y CW ES GH + IA+ + ++ TGS+D T R+WDC SG+C
Sbjct: 126 GDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Query: 245 TQVIR---PVKNKIFEGSWVSCVAIDASESW 272
T V++ + + EG W+ + ++W
Sbjct: 186 TGVLKLGGEIGCVLSEGPWLLVGMPNLVKAW 216
>AT5G25150.1 | chr5:8677117-8682058 FORWARD LENGTH=670
Length = 669
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 184 YAAAG--DACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGTARIWDCRS 241
Y A G D WDV++G+C F GH + S+A+ R + +G EDGT +WD +
Sbjct: 516 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Query: 242 GKC 244
+C
Sbjct: 576 ARC 578
>AT2G41500.1 | chr2:17304319-17306855 REVERSE LENGTH=555
Length = 554
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 178 KQEGSVYAAAG-DACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGTARI 236
+Q+G++ A+ G D+ A WD+ +G+ + F+GH + S+ + +G ED RI
Sbjct: 390 QQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRI 449
Query: 237 WDCRSGKCTQVIRPVKNKIFEGSWVSCVAIDASESWLVGCTS 278
WD R K +I N VS V + E + + S
Sbjct: 450 WDLRMRKSLYIIPAHAN------LVSQVKYEPQEGYFLATAS 485
>AT1G73720.1 | chr1:27725059-27729722 FORWARD LENGTH=512
Length = 511
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 172 NAIAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYL-HSIAVREANRQVVTGSE 230
+++ ++ + + + D A ++SGK F+GHT Y+ H+I + +R ++T S
Sbjct: 309 TSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSR-IITASS 367
Query: 231 DGTARIWDCRSGKCTQVIRP 250
D T ++WD ++ C Q +P
Sbjct: 368 DCTVKVWDSKTTDCLQTFKP 387
>AT1G11160.1 | chr1:3733406-3739363 FORWARD LENGTH=1022
Length = 1021
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 163 GARSPIPENNAIAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREAN 222
G SP+ +++A N +E V A A WD+E K F GH ++
Sbjct: 56 GHTSPV---DSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 112
Query: 223 RQVVTGSEDGTARIWDCRSGKCTQV----IRPVKNKIF--EGSWVSCVAID 267
+ +GS D R+WD R C Q R + F +G WV +D
Sbjct: 113 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLD 163
>AT4G25440.1 | chr4:13007107-13009381 REVERSE LENGTH=431
Length = 430
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 188 GDACAY--CWDVESGKCKMT-FKGHTDYLHSIAVREANRQVVTGSEDGTARIWDCRSGKC 244
GD C Y CW +T GH + IA+ + ++ T S+D T RIWDC SG+C
Sbjct: 119 GDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQC 178
Query: 245 TQVIR---PVKNKIFEGSWVSCVAIDASESW 272
T V+ V I EG W+ + ++W
Sbjct: 179 TGVLNLGGEVGCIISEGPWLLVGMPNLVKAW 209
>AT3G16650.1 | chr3:5671133-5675106 FORWARD LENGTH=480
Length = 479
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 168 IPENNAIAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVT 227
I + +A++ + +++A D CWD+E K ++ GH ++ +A+ V+T
Sbjct: 212 IGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLT 271
Query: 228 GSEDGTARIWDCRSGKCTQVIRPVKNKIF 256
G D R+WD R+ K + P + +F
Sbjct: 272 GGRDSVCRVWDIRT-KMQIFVLPHDSDVF 299
>AT5G08390.1 | chr5:2701448-2706910 FORWARD LENGTH=840
Length = 839
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 171 NNAIAINKQEGSVYAAAG--DACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTG 228
+N +++N + A+G D WD+ C T+KGHT ++ + R +V+G
Sbjct: 102 SNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSG 161
Query: 229 SEDGTARIWDCRSGKCTQVIRPVKNKI 255
ED ++WD +GK + + KI
Sbjct: 162 GEDNVVKVWDLTAGKLLHEFKSHEGKI 188
>AT4G15900.1 | chr4:9023775-9027443 FORWARD LENGTH=487
Length = 486
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 168 IPENNAIAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVT 227
I + +A++ + +++A D CWD+E K ++ GH ++ +A+ ++T
Sbjct: 218 IEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLT 277
Query: 228 GSEDGTARIWDCRSGK------------CTQVIRPVKNKIFEGS 259
G D R+WD R+ C+ RP ++ GS
Sbjct: 278 GGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGS 321
>AT2G21390.1 | chr2:9152428-9156577 FORWARD LENGTH=1219
Length = 1218
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 157 QHEGPWGARSPIPENNAIAINKQEGSVYAAAGDACAYCWDVESGKCKMTFKGHTDYLHSI 216
+HEGP + + + + D W+ ++ +C T GH DY+ ++
Sbjct: 49 EHEGPV---------RGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTV 99
Query: 217 AVREANRQVVTGSEDGTARIWDCRSGKCTQVI 248
N +V+ S+D T RIW+ +S C V+
Sbjct: 100 QFHHENPWIVSASDDQTIRIWNWQSRTCISVL 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,265,759
Number of extensions: 186437
Number of successful extensions: 900
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 928
Number of HSP's successfully gapped: 21
Length of query: 279
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 182
Effective length of database: 8,447,217
Effective search space: 1537393494
Effective search space used: 1537393494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)