Os09g0360400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0360400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.06 | 0.616 | 10.4 | 0.195 | 0.129 | -0.92 | -0.578 | -4.57 | -0.281 | 18.6 | 0.1619 | 4540 | -- | -- |
| 176.65 | 0.619 | 10.3 | 0.113 | 0.147 | -1.28 | -0.499 | -- | -0.271 | 17.8 | 0.6903 | 2724 | -- | -- |
| 172.42 | 0.612 | 10.4 | 0.208 | 0.156 | -0.926 | -- | -4.53 | -0.283 | 16.4 | 0.09441 | 4557 | -- | -- |
| 176.64 | 0.619 | 10.3 | 0.123 | 0.158 | -1.32 | -- | -- | -0.266 | 16.8 | 0.5741 | 2359 | -- | -- |
| 173.73 | 0.614 | 10.4 | 0.198 | -- | -0.915 | -- | -4.55 | -0.285 | -- | 0.0985 | 4542 | -- | -- |
| 204.11 | 0.67 | 10.3 | -0.213 | 0.155 | -- | 0.338 | -- | -0.204 | 14.7 | -- | -- | -- | -- |
| 204.26 | 0.669 | 10.3 | -0.204 | 0.176 | -- | -- | -- | -0.202 | 16.2 | -- | -- | -- | -- |
| 177.91 | 0.621 | 10.3 | 0.121 | -- | -1.32 | -- | -- | -0.27 | -- | 0.6016 | 2372 | -- | -- |
| 177.01 | 0.62 | 10.3 | -- | 0.154 | -1.27 | -- | -- | -0.276 | 16.9 | 0.5696 | 2379 | -- | -- |
| 205.94 | 0.671 | 10.3 | -0.211 | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
| 205.36 | 0.67 | 10.3 | -- | 0.18 | -- | -- | -- | -0.179 | 16.2 | -- | -- | -- | -- |
| 178.26 | 0.622 | 10.3 | -- | -- | -1.28 | -- | -- | -0.28 | -- | 0.6116 | 2396 | -- | -- |
| 207.11 | 0.672 | 10.3 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 2 | 160.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 3 | 160.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 6 | 160.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 8 | 161.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 9 | 161.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 10 | 161.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 13 | 161.47 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 14 | 161.47 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 18 | 161.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 20 | 161.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 34 | 162.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 35 | 162.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 36 | 162.50 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 37 | 162.50 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 40 | 162.69 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 41 | 162.77 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 45 | 162.86 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 49 | 162.91 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 50 | 162.94 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 53 | 163.00 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 58 | 163.15 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 60 | 163.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 62 | 163.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 70 | 163.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 72 | 163.31 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 76 | 163.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 77 | 163.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 85 | 163.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 91 | 163.88 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 93 | 163.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 94 | 163.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 98 | 164.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 99 | 164.09 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 116 | 164.47 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 117 | 164.53 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 119 | 164.57 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 145 | 165.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 147 | 165.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 153 | 165.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 158 | 165.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 164 | 165.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 165 | 165.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 166 | 165.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 198 | 165.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 200 | 165.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 202 | 165.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 203 | 165.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 216 | 165.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 223 | 165.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 227 | 166.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 230 | 166.02 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 232 | 166.02 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 238 | 166.06 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 239 | 166.07 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 244 | 166.12 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 259 | 166.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 16 |
| 280 | 166.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 281 | 166.49 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 284 | 166.51 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 357 | 166.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 361 | 166.84 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 381 | 166.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 393 | 167.01 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 430 | 167.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 448 | 167.32 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 463 | 167.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 483 | 167.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 498 | 167.64 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 504 | 167.66 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 521 | 167.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 525 | 167.74 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 533 | 167.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 536 | 167.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 543 | 167.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 546 | 167.80 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 569 | 167.87 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 588 | 168.01 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 619 | 168.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 621 | 168.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 661 | 168.31 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 663 | 168.31 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 672 | 168.35 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 677 | 168.35 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 706 | 168.47 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 737 | 168.66 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 747 | 168.69 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 772 | 168.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 807 | 168.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 862 | 169.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 876 | 169.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 891 | 169.32 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 12 |
| 907 | 169.40 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 962 | 169.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 9 |