Os09g0359900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0359900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.59 | 0.288 | 10.2 | 0.243 | 2.01 | 1.17 | 0.331 | 0.421 | -0.116 | 16.7 | 20.34 | 16 | -- | -- |
| 37.11 | 0.286 | 10.2 | 0.25 | 2.02 | 0.91 | 0.299 | -- | -0.0984 | 16.7 | 21.61 | 12 | -- | -- |
| 37.3 | 0.287 | 10.2 | 0.265 | 2.02 | 0.863 | -- | -0.21 | -0.0949 | 16.7 | 21.62 | 11 | -- | -- |
| 37.34 | 0.286 | 10.2 | 0.252 | 2.03 | 0.913 | -- | -- | -0.0968 | 16.7 | 21.6 | 7 | -- | -- |
| 246.41 | 0.735 | 10.2 | 0.157 | -- | -0.169 | -- | -1.65 | -0.203 | -- | 21.62 | 11 | -- | -- |
| 44.98 | 0.314 | 10.2 | 0.0901 | 1.97 | -- | 0.286 | -- | -0.185 | 16.8 | -- | -- | -- | -- |
| 45.19 | 0.315 | 10.2 | 0.0912 | 1.97 | -- | -- | -- | -0.184 | 16.8 | -- | -- | -- | -- |
| 200.84 | 0.66 | 10.3 | -0.306 | -- | -1.82 | -- | -- | -0.46 | -- | 46.68 | 219 | -- | -- |
| 38.88 | 0.292 | 10.2 | -- | 2.01 | 0.799 | -- | -- | -0.133 | 16.7 | 21.6 | 6 | -- | -- |
| 249.7 | 0.738 | 10.2 | 0.0179 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 45.41 | 0.315 | 10.2 | -- | 1.97 | -- | -- | -- | -0.194 | 16.8 | -- | -- | -- | -- |
| 203.76 | 0.665 | 10.3 | -- | -- | -1.7 | -- | -- | -0.425 | -- | 57.55 | 216 | -- | -- |
| 249.71 | 0.738 | 10.2 | -- | -- | -- | -- | -- | -0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 5 | 32.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 6 | 32.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 6 |
| 10 | 32.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 59 | 33.84 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 17 |
| 79 | 34.10 | temperature | 20 | 30 | > th | dose independent | rect. | 17 | 15 |
| 110 | 34.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 112 | 34.45 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 15 | 15 |
| 124 | 34.53 | temperature | 25 | 10 | < th | dose dependent | sin | 11 | NA |
| 130 | 34.62 | temperature | 15 | 10 | > th | dose dependent | sin | 11 | NA |
| 178 | 34.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 14 |
| 219 | 35.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 253 | 35.19 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 260 | 35.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 275 | 35.25 | temperature | 20 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 495 | 35.63 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 541 | 35.72 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 580 | 35.78 | temperature | 20 | 10 | < th | dose dependent | rect. | 16 | 19 |
| 593 | 35.79 | temperature | 20 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 675 | 35.89 | temperature | 20 | 10 | < th | dose dependent | rect. | 24 | 1 |
| 683 | 35.89 | temperature | 20 | 10 | < th | dose dependent | rect. | 20 | 14 |