BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0359900 Os09g0359900|AK105521
         (312 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14000.1  | chr4:8090851-8092347 FORWARD LENGTH=291            291   4e-79
AT2G43320.1  | chr2:17996874-17999158 REVERSE LENGTH=352          189   1e-48

>AT4G14000.1 | chr4:8090851-8092347 FORWARD LENGTH=291
          Length = 290

 Score =  291 bits (744), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 151/263 (57%), Positives = 187/263 (71%), Gaps = 9/263 (3%)

Query: 50  VEVLLSEESPVAAGELEPVVIDDSLSIYKGRASTSDVFGVKNSDLVPGKYEGGLKLWEGS 109
           VEVL  E S     E++ + I + +++ KGR ST +VFG+ NSDLVPG YEGGLKLWEGS
Sbjct: 37  VEVLSFEVSSSTDFEVDKLTIGE-ITLLKGRVSTKEVFGLPNSDLVPGVYEGGLKLWEGS 95

Query: 110 LDLVKTLNSDIKEDRLLLEGKRVLELGCGHGLPGIYAILKGAVLVHFQDFNAEVLRCLTI 169
           +DLVK L  + +   L   GKRVLELGCGH LPGIYA LKG+  VHFQDFNAEVLRCLTI
Sbjct: 96  IDLVKALEKESQTGNLSFSGKRVLELGCGHALPGIYACLKGSDAVHFQDFNAEVLRCLTI 155

Query: 170 PNVKANLLKESSEEKFTSGSVGFFAGDWSEIDSLLLRGDADLDKSTNSHENDTAYNGYDI 229
           PN+ ANL ++SS    +   V FFAG+WSE+  +L           NS        GYDI
Sbjct: 156 PNLNANLSEKSSSVSVSETEVRFFAGEWSEVHQVL--------PLVNSDGETNKKGGYDI 207

Query: 230 ILMAETVYAVSSLPNLYRLIKKCLRYPGGIVYMAGKKHYFGVGGGTRHFVRLVTEDGAMQ 289
           ILMAET+Y++S+  + Y LIK+CL YP G VYMA KK+YFGVGGGTR F+ ++ +DGA+ 
Sbjct: 208 ILMAETIYSISAQKSQYELIKRCLAYPDGAVYMAAKKYYFGVGGGTRQFLSMIEKDGALA 267

Query: 290 SDLLAEVADGSSNVREVWKLSFK 312
           S L+++V DGSSNVREVWKLS+K
Sbjct: 268 STLVSQVTDGSSNVREVWKLSYK 290



>AT2G43320.1 | chr2:17996874-17999158 REVERSE LENGTH=352
          Length = 351

 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 150/297 (50%), Gaps = 63/297 (21%)

Query: 74  LSIYKGRASTSDVFGVKNSDLVPGKYEGGLKLWEGSLDLVKTLNSDIKEDRLLLEGKRVL 133
           L ++KG+ S +D+ G+  S+  P K EG LK WE S+ LV  L ++I++ +L   GKRVL
Sbjct: 60  LQVFKGKVSVADIIGLSGSETAPLKNEGSLKSWESSVVLVNVLKNEIRDGQLSFRGKRVL 119

Query: 134 ELGCGHGLPGIYAILKGAVLVHFQDFNAEVLRCLTIPNVKANLLKESSEE---------- 183
           ELGC  G+PGI+A LKGA  VHFQD +AE +RC TIPNV ANL +    +          
Sbjct: 120 ELGCNFGVPGIFACLKGASSVHFQDLSAETIRCTTIPNVLANLEQARDRQSRQPESPLTP 179

Query: 184 --KFTSGSVGFFAGDWSEIDSLL----------------------------------LRG 207
             +  S SV F+AG+W E+ ++L                                  + G
Sbjct: 180 SRQAISASVRFYAGEWEELSTVLSIIRTDVLEPSIPAMNLSFSEEDFMDGCSSQDGSITG 239

Query: 208 DADLDKSTN---------SHENDTAYN---GYDIILMAETVYAVSSLPNLYRLIKKCLRY 255
             D     +            N+T      GYD+ILM E  Y+++SL  LY LIKKCLR 
Sbjct: 240 QPDFSSRRSRKLSGSRAWERANETGQEGEYGYDVILMTEIPYSITSLKKLYSLIKKCLRP 299

Query: 256 PGGIVYMAGKKHYFGVGGGTRHFVRLVTEDGAMQSDLLAEVADGSSNVREVWKLSFK 312
           P G++Y+A KK Y G   G +H   LV E+  + + L+ E  D     R++WK   K
Sbjct: 300 PYGVMYLAAKKQYVGFNSGAKHLRNLVDEETILGAHLVKETTD-----RDIWKFFLK 351



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.136    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,147,612
Number of extensions: 258358
Number of successful extensions: 477
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 475
Number of HSP's successfully gapped: 3
Length of query: 312
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 214
Effective length of database: 8,419,801
Effective search space: 1801837414
Effective search space used: 1801837414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 111 (47.4 bits)