Os09g0346400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0346400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.24 | 0.267 | 12.1 | 0.36 | 0.19 | -0.582 | -0.69 | 0.00779 | 0.349 | 5.37 | 137.9 | 1291 | -- | -- |
| 32.24 | 0.264 | 12.1 | 0.359 | 0.189 | -0.579 | -0.692 | -- | 0.349 | 5.4 | 174 | 1295 | -- | -- |
| 33.02 | 0.268 | 12.1 | 0.354 | 0.213 | -0.686 | -- | 0.0178 | 0.346 | 2.76 | 95 | 1141 | -- | -- |
| 33.01 | 0.268 | 12.1 | 0.36 | 0.218 | -0.693 | -- | -- | 0.348 | 2.69 | 95 | 1135 | -- | -- |
| 34.61 | 0.274 | 12.1 | 0.388 | -- | -0.512 | -- | -0.0402 | 0.324 | -- | 86 | 1532 | -- | -- |
| 39.55 | 0.295 | 12.1 | 0.327 | 0.136 | -- | -0.75 | -- | 0.327 | 5.98 | -- | -- | -- | -- |
| 40.93 | 0.3 | 12.1 | 0.32 | 0.132 | -- | -- | -- | 0.33 | 6.1 | -- | -- | -- | -- |
| 34.61 | 0.274 | 12.1 | 0.385 | -- | -0.52 | -- | -- | 0.324 | -- | 86 | 1530 | -- | -- |
| 36.43 | 0.281 | 12.1 | -- | 0.218 | -0.658 | -- | -- | 0.311 | 2.83 | 132.6 | 1137 | -- | -- |
| 41.84 | 0.302 | 12.1 | 0.324 | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
| 43.63 | 0.309 | 12.1 | -- | 0.137 | -- | -- | -- | 0.294 | 5.98 | -- | -- | -- | -- |
| 38.08 | 0.287 | 12.1 | -- | -- | -0.52 | -- | -- | 0.314 | -- | 176.6 | 1634 | -- | -- |
| 44.61 | 0.312 | 12.1 | -- | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.59 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 29.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 4 | 30.14 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 5 | 30.16 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 9 | 30.54 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 12 | 30.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 14 | 30.78 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 17 | 30.79 | humidity | 90 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 22 | 30.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 23 | 30.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 31 | 30.89 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 105 | 31.22 | humidity | 90 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 286 | 32.12 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 292 | 32.14 | humidity | 90 | 720 | > th | dose dependent | sin | 20 | NA |
| 295 | 32.14 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 305 | 32.17 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 308 | 32.18 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 310 | 32.19 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 319 | 32.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 334 | 32.22 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 352 | 32.24 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 366 | 32.25 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 376 | 32.26 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 395 | 32.28 | humidity | 70 | 1440 | > th | dose dependent | sin | 23 | NA |
| 407 | 32.29 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 17 |
| 535 | 32.39 | humidity | 50 | 720 | > th | dose dependent | sin | 14 | NA |
| 574 | 32.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 585 | 32.42 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 627 | 32.45 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 709 | 32.50 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 1 |
| 728 | 32.51 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 779 | 32.54 | humidity | 90 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 789 | 32.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 808 | 32.56 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 843 | 32.59 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 864 | 32.60 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 880 | 32.62 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 932 | 32.65 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 941 | 32.65 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 955 | 32.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 989 | 32.68 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |