BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0346400 Os09g0346400|AB117987
(627 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27500.1 | chr4:13743614-13745900 FORWARD LENGTH=613 319 3e-87
AT3G15340.1 | chr3:5160016-5162305 REVERSE LENGTH=590 138 7e-33
AT5G36690.1 | chr5:14415185-14417288 REVERSE LENGTH=577 112 6e-25
AT5G36780.1 | chr5:14474485-14476588 REVERSE LENGTH=577 112 6e-25
AT1G53110.1 | chr1:19790434-19792016 FORWARD LENGTH=440 95 1e-19
AT1G20970.1 | chr1:7314338-7319246 FORWARD LENGTH=1365 84 3e-16
>AT4G27500.1 | chr4:13743614-13745900 FORWARD LENGTH=613
Length = 612
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/425 (43%), Positives = 263/425 (61%), Gaps = 38/425 (8%)
Query: 1 MGMEVV---GTEAAPA-------------EVKVTDGEVNLFQENESKATAKEREEAVLFG 44
MG+EVV G E APA + K D +N E A+E V+
Sbjct: 1 MGVEVVNSGGFEVAPAPFEGKPEKNGKLDQGKGDDAPINFGSVGELPKNAEENNNKVVNS 60
Query: 45 XXXXXXXXXXXXXXXXLAPPKDAEEDWPEARKTHSFFFVKIRLLEDPKLKMKIDQAEKDF 104
PK+A E+WP A++ HSF+ VK R DPK+K K+D A+K+
Sbjct: 61 DA-----------------PKNAAEEWPVAKQIHSFYLVKYRSYADPKIKAKLDLADKEL 103
Query: 105 QKKIQARSQIFEAIKAKKNERFGIISELKPLAAENKQYNEAVSEKLKAIEPLRNRLGKFR 164
+K +AR+ + + ++AK+ ER + L PL +E K +N EK K +EPL+ LGK R
Sbjct: 104 EKLNKARTGVLDKLRAKRAERSELFDLLDPLKSERKGFNTMFDEKRKEMEPLQQALGKLR 163
Query: 165 DENNAIRAQGAGICSSIEELEKSIKRLNDRISHESIPLDEEKRLIKQIRELEKTRPKVIS 224
N+ A+G ICSS EEL I RI HESIPL EEK+++K+IR LE TR KVI+
Sbjct: 164 S-NDGGSARGPAICSSEEELNSMIYSYQYRIQHESIPLTEEKQILKEIRLLEGTRDKVIA 222
Query: 225 TSANRAQIQDTVVERDAIQDQVKIIGEGIDGVKKERQAVRSKIKVLEDELKAIDMEMGSL 284
+A RA+I++++ ++D IQ QVK++G G+DGVKKERQA+ ++I L ++LKA E+ L
Sbjct: 223 NAAMRAKIKESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKDEITVL 282
Query: 285 QEDLTAANARKDKAHESLVQLRHARDAYNASFHQNRQLLSKARDLASRSELAQVQELYKT 344
+ +L + ++DKA+ ++ LR RD N+ ++QNR +L+KARDLA++ +++++ L
Sbjct: 283 ENELKTVSEKRDKAYSNIHDLRRQRDETNSEYYQNRTVLNKARDLAAQKNISELEALANA 342
Query: 345 QVDKFVAEWCNSKAFREDYEKRILSSLNSRQLSRDGRMRNPDEKPIFIETEAA---APPV 401
+V+KF++ WC+ K FREDYEKRIL SL+SRQLSRDGRMRNPDEKP+ I EAA A P
Sbjct: 343 EVEKFISLWCSKKNFREDYEKRILQSLDSRQLSRDGRMRNPDEKPL-IAPEAAPSKATPS 401
Query: 402 EQEPI 406
E E +
Sbjct: 402 ETEVV 406
>AT3G15340.1 | chr3:5160016-5162305 REVERSE LENGTH=590
Length = 589
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 180/337 (53%), Gaps = 32/337 (9%)
Query: 62 APPKDAEEDWPEARKTHSFFFVKIRLLEDPKLKMKIDQAEKDFQKKIQARSQIFEAIKAK 121
+P EED+PE K SF+FVK +DP++K KID+A + + + R + A +++
Sbjct: 52 SPGGATEEDFPE-EKPFSFYFVKQPAYDDPEIKAKIDEAGHEINRYNKDRIVVSNAQESE 110
Query: 122 KNERFGIISELKPLAAENKQYNEAVSEKLKAIEPLRNRLGKFRDENNAIRAQGAGICSSI 181
K E + ++K L ++++ Y + EK + L L R + +C S
Sbjct: 111 KAEILSLFGQMKSLVSKSEGYRVVIEEKKMEFDALHESLRNLR------CSTSDQLCFSK 164
Query: 182 EELEKSIKRLNDRISHESIPLDEEKRLIKQIRELEKTRPKVISTSANRAQIQDTVVERDA 241
EEL+ I + +I H SI +EE ++K E EK V+S +D++ E++A
Sbjct: 165 EELDHLIYIAHYQIEHGSIGFEEEDWVLK---ETEKADGIVLS--------EDSLAEKEA 213
Query: 242 IQDQVKIIGEGIDGVKKERQAVRSKIKVLEDELKAIDMEMGSLQEDLTAANARK------ 295
++VK + ++ VKKE A+ KI L D++ G Q +L + +K
Sbjct: 214 SINRVKSMAVELNEVKKELDAITWKINHLSDKV-------GKSQNNLRVLDVKKAHILEE 266
Query: 296 -DKAHESLVQLRHARDAYNASFHQNRQLLSKARDLASRSELAQVQELYKTQVDKFVAEWC 354
D+++E + LR RD A+F+Q+ ++ KAR+LA+ + ++ ++ D+F+ +W
Sbjct: 267 RDRSYERIKMLRIQRDKGKAAFYQSLPVMRKARELAASGNVRDLEVFASSEADRFMTQWN 326
Query: 355 NSKAFREDYEKRILSSLNSRQLSRDGRMRNPDEKPIF 391
+ KAFR+DY KRI SL RQL++DGR+++P+ + ++
Sbjct: 327 DDKAFRDDYVKRISPSLCERQLNQDGRIKDPEVQVVW 363
>AT5G36690.1 | chr5:14415185-14417288 REVERSE LENGTH=577
Length = 576
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 38/351 (10%)
Query: 67 AEEDWPEARKTHSFFFVKIRLLEDPKLKMKIDQAEKDFQKKIQARSQIFEAIKAKKNERF 126
AEED K SF+ VK + ++P++K KID+A ++ + + R + A K++ E
Sbjct: 57 AEED-SSGDKPLSFYIVKQPVYDNPEIKAKIDEANQEIFRCNELRINVLSAKKSELAEVS 115
Query: 127 GIISELKPLAAENKQYNEAVSEKLKAIEPLRNRLGKFRDENNAIRAQGAGICSSIEELEK 186
+ ++++ L +++ Y + EK K + L L R +C + EEL+
Sbjct: 116 SLYTQMESLVPQSEGYRMVIEEKKKEFDTLLEALRNLR------CTTSDQLCFTKEELDH 169
Query: 187 SIKRLNDRISHESIPLDEEKRLIKQIRELEKTRPKVISTSANRAQIQDTVVERDAIQDQV 246
+I + SI L+EE ++K E +P I S A I ++V
Sbjct: 170 LSYIAQYQIEYGSIGLEEEDWMLK-----ETEKPDGIILSEKEASI-----------NRV 213
Query: 247 KIIGEGIDGVKKERQAVRSKIKVLEDEL-------KAIDMEMGSLQEDLTAANARKDKAH 299
K + ++ VK E A+ KI L D+L + +D+E + E ++D+ +
Sbjct: 214 KSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHILE-------KRDRFY 266
Query: 300 ESLVQLRHARDAYNASFHQNRQLLSKARDLASRSELAQVQELYKTQVDKFVAEWCNSKAF 359
+ LR RD NA+F Q+ ++ KA++LA+ + +++ ++VD+F+ W + KAF
Sbjct: 267 ARIKMLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWNDDKAF 326
Query: 360 REDYEKRILSSLNSRQLSRDGRMRNPDEKPIFIETEAAAPPVEQEPIQSKM 410
REDY +RI SL R+L+ DGR+++ D + IF E + +++ KM
Sbjct: 327 REDYVRRISHSLCERELNEDGRIKDADLQ-IFWEKKVPVKTIKRSEKVHKM 376
>AT5G36780.1 | chr5:14474485-14476588 REVERSE LENGTH=577
Length = 576
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 38/351 (10%)
Query: 67 AEEDWPEARKTHSFFFVKIRLLEDPKLKMKIDQAEKDFQKKIQARSQIFEAIKAKKNERF 126
AEED K SF+ VK + ++P++K KID+A ++ + + R + A K++ E
Sbjct: 57 AEED-SSGDKPLSFYIVKQPVYDNPEIKAKIDEANQEIFRCNELRINVLSAKKSELAEVS 115
Query: 127 GIISELKPLAAENKQYNEAVSEKLKAIEPLRNRLGKFRDENNAIRAQGAGICSSIEELEK 186
+ ++++ L +++ Y + EK K + L L R +C + EEL+
Sbjct: 116 SLYTQMESLVPQSEGYRMVIEEKKKEFDTLLEALRNLR------CTTSDQLCFTKEELDH 169
Query: 187 SIKRLNDRISHESIPLDEEKRLIKQIRELEKTRPKVISTSANRAQIQDTVVERDAIQDQV 246
+I + SI L+EE ++K E +P I S A I ++V
Sbjct: 170 LSYIAQYQIEYGSIGLEEEDWMLK-----ETEKPDGIILSEKEASI-----------NRV 213
Query: 247 KIIGEGIDGVKKERQAVRSKIKVLEDEL-------KAIDMEMGSLQEDLTAANARKDKAH 299
K + ++ VK E A+ KI L D+L + +D+E + E ++D+ +
Sbjct: 214 KSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHILE-------KRDRFY 266
Query: 300 ESLVQLRHARDAYNASFHQNRQLLSKARDLASRSELAQVQELYKTQVDKFVAEWCNSKAF 359
+ LR RD NA+F Q+ ++ KA++LA+ + +++ ++VD+F+ W + KAF
Sbjct: 267 ARIKMLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWNDDKAF 326
Query: 360 REDYEKRILSSLNSRQLSRDGRMRNPDEKPIFIETEAAAPPVEQEPIQSKM 410
REDY +RI SL R+L+ DGR+++ D + IF E + +++ KM
Sbjct: 327 REDYVRRISHSLCERELNEDGRIKDADLQ-IFWEKKVPVKTIKRSEKVHKM 376
>AT1G53110.1 | chr1:19790434-19792016 FORWARD LENGTH=440
Length = 439
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Query: 253 IDGVKKERQAVRSKIKVLEDELKAIDMEMGSLQEDLTAANARKDKAHESLVQLRHARDAY 312
I+ V+KE++ VR +I L + L I ME+ L + ++DKA E + LR RD
Sbjct: 112 INEVEKEQEVVRGRIYRLGERLSEIKMEIELLDVQMACVLNQRDKAVERIKFLRMQRDKG 171
Query: 313 NASFHQNRQLLSKARDLASRSELAQVQELYKTQVDKFVAEWCNSKAFREDYEKRILSSLN 372
NA+F+Q+R ++ KA +LA+ + ++EL ++V+KF++ W N KAFR++Y+KRIL S+N
Sbjct: 172 NAAFYQSRVVMKKAIELAASGNVRDLEELADSEVEKFMSRWNNDKAFRDNYKKRILPSVN 231
Query: 373 SRQLSRDGRMRNPDEKPIFIETEAAAPPVEQEPIQSK 409
R+L D ++R+ + ++TE V ++ I+ K
Sbjct: 232 ERKLRCDVQIRDLEGN---LDTENGNETVVKKAIEYK 265
>AT1G20970.1 | chr1:7314338-7319246 FORWARD LENGTH=1365
Length = 1364
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 80 FFFVKIRLLEDPKLKMKIDQAEKDFQKKIQARSQIFEAIKAKKNERFGIISEL----KPL 135
+F ++ +D KL ++ AE+ +K Q R +A++A + I + K +
Sbjct: 785 YFLPRVPRYDDEKLAEQLKHAEEQVDQKTQNR----DALRADIQKIRAICKDYDISYKAV 840
Query: 136 AAENKQYNEAVSEKLKAIEPLRNRLGKFRDENNAIRAQGAGICSSIEELEKSIKRLNDRI 195
AE + +A+ K + IE L++ + + + +S+++++ ++ + +
Sbjct: 841 MAEERSARKAMHSKRQEIEALQSMISRVKS------------AASVDDIDSRVRNMEHTM 888
Query: 196 SHESIPLDEEKRLIKQIRELEKTRPKVISTSANRAQIQDTVVERDAIQDQVKIIGEGIDG 255
H ++ L+EEK +++I++L++ R ++ S+ + +++ + E++ ++++K++
Sbjct: 889 QHTTLSLNEEKGFMREIKQLKQLREQISSSMGTKDEVKQALDEKEKTEERLKVL------ 942
Query: 256 VKKERQAVRSKIKVLEDELKA----IDME---MGSLQEDLTAANARKDKAHESLVQLRHA 308
+KE A+R+ + E+ KA D E LQE AA+A + +A L L+
Sbjct: 943 -RKELDALRNDLSKAEEITKAAKKKCDGEWEAQSKLQEQFRAADAVRQEAFVHLQDLKKQ 1001
Query: 309 RDAYNASFHQNRQLLSKARDLASRSELAQVQELYKTQVDKFVAEWCNSKAFREDYEKRIL 368
+ N F + R A ++A + + A +Q L QV+ F+ W N FR+ Y K
Sbjct: 1002 QREKNKYFFKYRDNSRAASEMALKKDRAALQSLCSDQVENFMNMWNNDDEFRKYYVKSNT 1061
Query: 369 SSLNSRQLSRDGRMRNPDEKP 389
S R + DGR PDE+P
Sbjct: 1062 RSTFRRLGTLDGRSLGPDEEP 1082
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.127 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,632,481
Number of extensions: 348145
Number of successful extensions: 1656
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 1667
Number of HSP's successfully gapped: 10
Length of query: 627
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 522
Effective length of database: 8,227,889
Effective search space: 4294958058
Effective search space used: 4294958058
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)