Os09g0327000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF599 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0327000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF599 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324.97 | 0.847 | 4.53 | 1.63 | 0.569 | 3 | 0.59 | 4.63 | -0.366 | 7.7 | 18.91 | 6141 | -- | -- |
| 342.17 | 0.862 | 4.34 | 2.08 | 0.552 | 1.73 | 0.46 | -- | -0.192 | 6.88 | 19.7 | 6378 | -- | -- |
| 325.65 | 0.84 | 4.54 | 1.66 | 0.564 | 3.05 | -- | 4.73 | -0.364 | 7.55 | 18.93 | 6222 | -- | -- |
| 341.82 | 0.861 | 4.34 | 1.92 | 0.549 | 1.6 | -- | -- | -0.242 | 7.47 | 19.7 | 6380 | -- | -- |
| 342.4 | 0.862 | 4.56 | 1.7 | -- | 3.16 | -- | 4.91 | -0.347 | -- | 18.96 | 6452 | -- | -- |
| 377.25 | 0.911 | 4.46 | 0.835 | 0.575 | -- | 0.648 | -- | -0.703 | 7.83 | -- | -- | -- | -- |
| 378.45 | 0.911 | 4.46 | 0.851 | 0.577 | -- | -- | -- | -0.704 | 7.7 | -- | -- | -- | -- |
| 358.55 | 0.882 | 4.35 | 1.95 | -- | 1.62 | -- | -- | -0.234 | -- | 19.7 | 6381 | -- | -- |
| 386.09 | 0.92 | 4.43 | -- | 0.574 | 0.4 | -- | -- | -0.609 | 9.27 | 24.6 | 2816 | -- | -- |
| 396.39 | 0.93 | 4.47 | 0.859 | -- | -- | -- | -- | -0.696 | -- | -- | -- | -- | -- |
| 397.53 | 0.933 | 4.48 | -- | 0.584 | -- | -- | -- | -0.799 | 7.6 | -- | -- | -- | -- |
| 383.13 | 0.912 | 4.45 | -- | -- | 0.765 | -- | -- | -0.591 | -- | 22.5 | 685 | -- | -- |
| 415.83 | 0.952 | 4.49 | -- | -- | -- | -- | -- | -0.791 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 9 | 326.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 10 | 326.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 40 | 330.95 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 43 | 331.40 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 45 | 331.86 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 48 | 332.05 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 50 | 332.16 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 51 | 332.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 16 |
| 55 | 332.26 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 72 | 332.60 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 74 | 332.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 76 | 332.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 82 | 332.69 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 85 | 332.75 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 86 | 332.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 105 | 332.95 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 113 | 333.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 117 | 333.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 137 | 333.25 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 139 | 333.28 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 146 | 333.34 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 159 | 333.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 251 | 334.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 265 | 334.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 315 | 334.78 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 364 | 335.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 387 | 335.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 405 | 335.23 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 436 | 335.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 475 | 335.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 525 | 335.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 604 | 336.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 690 | 336.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 720 | 336.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 748 | 336.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 757 | 336.50 | temperature | 20 | 4320 | < th | dose dependent | sin | 11 | NA |
| 766 | 336.52 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 803 | 336.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 815 | 336.67 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 826 | 336.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 21 |
| 827 | 336.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 833 | 336.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 835 | 336.74 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 845 | 336.76 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 4 |
| 887 | 336.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 21 |
| 919 | 336.91 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 922 | 336.91 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 938 | 336.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 23 |
| 946 | 336.95 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |