Os09g0315800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0315800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.87 | 0.273 | 9.59 | -1.09 | 0.642 | -0.597 | -0.437 | 1.25 | -0.171 | 6.8 | 29.07 | 91 | -- | -- |
| 35.83 | 0.279 | 9.56 | -0.886 | 0.635 | -0.618 | -0.313 | -- | -0.123 | 6.85 | 27.9 | 82 | -- | -- |
| 34.34 | 0.273 | 9.59 | -1.09 | 0.64 | -0.593 | -- | 1.18 | -0.166 | 6.86 | 29.1 | 90 | -- | -- |
| 36.12 | 0.28 | 9.56 | -0.886 | 0.638 | -0.622 | -- | -- | -0.121 | 6.81 | 28 | 82 | -- | -- |
| 52.22 | 0.338 | 9.57 | -0.89 | -- | -0.827 | -- | 0.386 | -0.0511 | -- | 20.73 | 32 | -- | -- |
| 40.99 | 0.3 | 9.54 | -0.721 | 0.571 | -- | -0.394 | -- | 0.0123 | 7.93 | -- | -- | -- | -- |
| 41.45 | 0.301 | 9.54 | -0.731 | 0.572 | -- | -- | -- | 0.0127 | 7.93 | -- | -- | -- | -- |
| 52.34 | 0.338 | 9.57 | -0.874 | -- | -0.925 | -- | -- | -0.049 | -- | 20.73 | 32 | -- | -- |
| 54.56 | 0.346 | 9.53 | -- | 0.572 | -0.249 | -- | -- | 0.0478 | 7.5 | 28 | 82 | -- | -- |
| 59.23 | 0.36 | 9.55 | -0.725 | -- | -- | -- | -- | 0.0202 | -- | -- | -- | -- | -- |
| 55.54 | 0.349 | 9.52 | -- | 0.567 | -- | -- | -- | 0.0941 | 8.02 | -- | -- | -- | -- |
| 70.81 | 0.393 | 9.54 | -- | -- | -0.475 | -- | -- | 0.0685 | -- | 21.31 | 6 | -- | -- |
| 73.1 | 0.399 | 9.53 | -- | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.40 | temperature | 15 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 2 | 32.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 3 | 32.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 6 | 32.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 7 | 32.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 57 | 33.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 70 | 33.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 77 | 33.11 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 85 | 33.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 89 | 33.15 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 116 | 33.25 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 150 | 33.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 153 | 33.32 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 11 | 20 |
| 167 | 33.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 8 |
| 170 | 33.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 12 |
| 248 | 33.45 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 249 | 33.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 265 | 33.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 307 | 33.51 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 323 | 33.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 339 | 33.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 354 | 33.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 366 | 33.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 379 | 33.57 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 380 | 33.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 398 | 33.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 504 | 33.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 22 | 15 |
| 508 | 33.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 514 | 33.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 579 | 33.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 668 | 33.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 729 | 33.79 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 747 | 33.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 755 | 33.80 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 772 | 33.81 | radiation | 30 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 820 | 33.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 22 | 17 |
| 829 | 33.83 | radiation | 30 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 852 | 33.84 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 884 | 33.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 886 | 33.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 948 | 33.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 957 | 33.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 997 | 33.92 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |