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Os09g0314300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peroxin-3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0119) R2 : 0.0122
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0596 (0.0251) R2dN8 : 0.0158 R2N8 : 0.0122
σ : 0.224
deviance : 23.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.59 0.197 9.95 0.0991 0.158 -0.0261 -0.0415 3.23 -0.0349 6.11 29.15 843 -- --
18.14 0.198 10 -0.304 0.131 0.309 -0.164 -- -0.0485 5.91 29.5 2042 -- --
17.59 0.195 9.95 0.101 0.158 -0.0254 -- 3.23 -0.0339 6.1 29.1 843 -- --
18.21 0.199 10 -0.302 0.13 0.309 -- -- -0.0467 5.69 29.49 2041 -- --
18.33 0.199 9.93 0.272 -- -0.124 -- 3.21 -0.0328 -- 29.8 1287 -- --
20.93 0.214 10 -0.233 0.118 -- -0.157 -- -0.0887 5.32 -- -- -- --
20.97 0.214 10 -0.234 0.117 -- -- -- -0.0881 4.84 -- -- -- --
18.92 0.203 10 -0.298 -- 0.262 -- -- -0.0378 -- 30.21 2660 -- --
20.51 0.211 9.99 -- 0.121 0.253 -- -- -0.0198 5.58 29.73 2007 -- --
21.7 0.218 10 -0.229 -- -- -- -- -0.085 -- -- -- -- --
22.41 0.221 10 -- 0.113 -- -- -- -0.0621 4.9 -- -- -- --
21.05 0.214 9.99 -- -- 0.2 -- -- -0.0138 -- 30.2 1262 -- --
23.09 0.224 10 -- -- -- -- -- -0.0596 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.23 wind 9 43200 > th dose dependent rect. 18 13
3 17.31 wind 9 14400 > th dose dependent rect. 17 18
5 17.36 wind 9 14400 < th dose independent rect. 18 3
6 17.36 temperature 30 720 < th dose independent rect. 15 6
13 17.40 temperature 30 720 < th dose independent rect. 15 21
15 17.42 wind 9 14400 > th dose dependent rect. 17 4
16 17.42 wind 9 14400 > th dose dependent rect. 17 7
20 17.43 wind 9 43200 > th dose independent rect. 18 13
29 17.45 wind 9 14400 < th dose independent rect. 18 7
35 17.47 wind 9 14400 > th dose independent rect. 18 3
46 17.53 wind 9 14400 > th dose independent rect. 18 6
53 17.55 radiation 1 43200 < th dose dependent rect. 19 6
65 17.58 wind 9 14400 < th dose independent rect. 18 17
74 17.60 wind 9 43200 < th dose independent rect. 18 13
92 17.65 temperature 30 720 < th dose independent rect. 24 21
93 17.65 temperature 30 720 > th dose dependent rect. 13 21
98 17.66 wind 9 14400 > th dose dependent sin 11 NA
99 17.66 temperature 30 720 > th dose dependent sin 17 NA
101 17.67 wind 5 14400 > th dose independent rect. 20 1
104 17.67 temperature 30 720 < th dose independent rect. 15 15
106 17.67 wind 9 14400 > th dose independent rect. 18 17
107 17.67 temperature 30 720 > th dose independent rect. 15 20
108 17.67 temperature 30 720 > th dose independent rect. 16 22
114 17.68 wind 1 4320 < th dose independent rect. 4 2
124 17.68 temperature 30 720 > th dose dependent rect. 13 6
133 17.68 wind 9 14400 > th dose dependent rect. 20 15
152 17.69 radiation 1 43200 < th dose dependent rect. 19 8
169 17.70 wind 5 14400 < th dose independent rect. 20 1
185 17.71 temperature 30 720 > th dose independent rect. 12 22
211 17.72 wind 9 14400 > th dose dependent rect. 20 8
219 17.73 temperature 30 720 > th dose dependent no NA NA
367 17.75 temperature 30 720 > th dose independent sin 18 NA
368 17.75 wind 1 4320 > th dose independent rect. 4 2
371 17.75 wind 9 14400 > th dose independent rect. 20 8
373 17.75 temperature 30 720 < th dose independent rect. 9 12
380 17.75 wind 9 43200 > th dose dependent sin 13 NA
381 17.75 wind 5 14400 > th dose dependent rect. 20 1
383 17.75 temperature 30 1440 > th dose dependent rect. 13 1
409 17.76 wind 9 14400 > th dose independent rect. 20 5
438 17.76 wind 7 43200 > th dose dependent rect. 14 19
461 17.77 temperature 15 10 > th dose dependent rect. 3 8
473 17.78 temperature 25 270 > th dose dependent rect. 16 16
492 17.80 temperature 30 720 > th dose independent sin 11 NA
493 17.80 temperature 30 720 > th dose independent no NA NA
496 17.80 temperature 30 1440 < th dose independent rect. 9 3
501 17.80 temperature 30 720 > th dose independent rect. 9 10
618 17.81 temperature 30 1440 < th dose independent rect. 11 1
624 17.81 temperature 30 1440 > th dose independent rect. 9 5
627 17.81 wind 7 43200 > th dose independent rect. 15 17
628 17.81 temperature 30 720 < th dose independent rect. 9 18
639 17.81 radiation 1 43200 < th dose dependent rect. 22 3
705 17.82 wind 9 43200 > th dose independent sin 12 NA
708 17.82 temperature 30 720 > th dose independent rect. 12 7
739 17.82 wind 5 14400 > th dose independent rect. 17 21
760 17.83 temperature 30 1440 < th dose independent rect. 5 7
765 17.83 temperature 30 1440 < th dose independent rect. 2 10
776 17.83 temperature 30 1440 < th dose independent rect. 18 18
851 17.84 wind 7 43200 < th dose independent rect. 15 17
993 17.85 temperature 30 720 < th dose independent no NA NA
996 17.85 temperature 30 1440 > th dose independent rect. 9 3